CircID: TC-hsa-NADK_0011

CircRNA information
Taxonomy:
Genome Version:
hg38 
Location:
chr1:1761952~1765446 
Gene:
Gene type:
protein_coding
Strand:
-
exons:
ORFS:
Xref:
circAtlas: hsa-NADK_0002
deepbase2: hsa-circRNA8254-4
circpedia2: HSA_CIRCpedia_28647
Evidences
Ribosome/polysome profiling 0.33333
Evidence score: 3.345351
MS Q-Value:
ORF 1.0
IRES sequence 0.21346
Translation initiation site 0.0
SeqComp 0.79856
m6A sites 1.0
MS evidence 0.0
Other evidences Upload
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Structure
IRES
m6A
TIS
circRNA sequence
GCATCAGTGTTTTTCTGACCGAAGTTCTCATTTCCTGACAATGGAAATGGAACAAGAAAAAATGACCATGAATAAGGAATTGAGTCCAGACGCGGCTGCTTACTGCTGCTCGGCCTGCCACGGCGATGAGACCTGGAGTTACAACCACCCCATCCGGGGCCGGGCCAAGTCTCGCAGCCTGTCTGCCTCGCCCGCCCTGGGGAGCACCAAGGAGTTCAGGAGGACACGCTCTCTTCATGGGCCATGCCCGGTGACCACTTTTGGACCAAAGGCCTGTGTGCTGCAGAACCCCCAGACCATCAT
Exons
  • exon1:1765446~1765228
  • exon2:1762035~1761952
m6A sites
  • 1765316
IRES sequence
  • 1765390~1765384
  • 1765378~1765371
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
  • Start: 41
  • Stop: 40
  • Length: 909
  • Translation cycles: 3
ATGGAAATGGAACAAGAAAAAATGACCATGAATAAGGAATTGAGTCCAGACGCGGCTGCTTACTGCTGCTCGGCCTGCCACGGCGATGAGACCTGGAGTTACAACCACCCCATCCGGGGCCGGGCCAAGTCTCGCAGCCTGTCTGCCTCGCCCGCCCTGGGGAGCACCAAGGAGTTCAGGAGGACACGCTCTCTTCATGGGCCATGCCCGGTGACCACTTTTGGACCAAAGGCCTGTGTGCTGCAGAACCCCCAGACCATCATGCATCAGTGTTTTTCTGACCGAAGTTCTCATTTCCTGACAATGGAAATGGAACAAGAAAAAATGACCATGAATAAGGAATTGAGTCCAGACGCGGCTGCTTACTGCTGCTCGGCCTGCCACGGCGATGAGACCTGGAGTTACAACCACCCCATCCGGGGCCGGGCCAAGTCTCGCAGCCTGTCTGCCTCGCCCGCCCTGGGGAGCACCAAGGAGTTCAGGAGGACACGCTCTCTTCATGGGCCATGCCCGGTGACCACTTTTGGACCAAAGGCCTGTGTGCTGCAGAACCCCCAGACCATCATGCATCAGTGTTTTTCTGACCGAAGTTCTCATTTCCTGACAATGGAAATGGAACAAGAAAAAATGACCATGAATAAGGAATTGAGTCCAGACGCGGCTGCTTACTGCTGCTCGGCCTGCCACGGCGATGAGACCTGGAGTTACAACCACCCCATCCGGGGCCGGGCCAAGTCTCGCAGCCTGTCTGCCTCGCCCGCCCTGGGGAGCACCAAGGAGTTCAGGAGGACACGCTCTCTTCATGGGCCATGCCCGGTGACCACTTTTGGACCAAAGGCCTGTGTGCTGCAGAACCCCCAGACCATCATGCATCAGTGTTTTTCTGACCGAAGTTCTCATTTCCTGACA
MEMEQEKMTMNKELSPDAAAYCCSACHGDETWSYNHPIRGRAKSRSLSASPALGSTKEFRRTRSLHGPCPVTTFGPKACVLQNPQTIMHQCFSDRSSHFLTMEMEQEKMTMNKELSPDAAAYCCSACHGDETWSYNHPIRGRAKSRSLSASPALGSTKEFRRTRSLHGPCPVTTFGPKACVLQNPQTIMHQCFSDRSSHFLTMEMEQEKMTMNKELSPDAAAYCCSACHGDETWSYNHPIRGRAKSRSLSASPALGSTKEFRRTRSLHGPCPVTTFGPKACVLQNPQTIMHQCFSDRSSHFLT