TransCirc

CircID: TC-hsa-NMNAT2_0024

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr1:183293705~183418281

Gene:

NMNAT2

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-NMNAT2_0018

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 2.854665 MS Q-Value: 0.002435
ORF	1.0
IRES sequence	0.03788
Translation initiation site	0.0
SeqComp	0.81678
m6A sites	0.0
MS evidence	1.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

GACCCATCTGCACCATGACCGAGACCACCAAGACCCACGTTATCTTGCTCGCCTGCGGCAGCTTCAATCCCATCACCAAAGGGCACATTCAGATGTTTGAAAGAGCCAGGGATTATCTGCACAAAACTGGAAGGTTTATTGTGATTGGCGGGATTGTCTCCCCTGTCCACGACTCCTATGGAAAACAG

Exons

exon1:183418281~183418183
exon2:183293793~183293705

IRES sequence

183293772~183293767

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 178
Stop: 100
Length: 111
Translation cycles: 1

ATGGAAAACAGGACCCATCTGCACCATGACCGAGACCACCAAGACCCACGTTATCTTGCTCGCCTGCGGCAGCTTCAATCCCATCACCAAAGGGCACATTCAGATGTTTGA

MENRTHLHHDRDHQDPRYLARLRQLQSHHQRAHSDV*

Q-Value: 0.002435

Start: 15
Stop: 18
Length: 192
Translation cycles: 1

ATGACCGAGACCACCAAGACCCACGTTATCTTGCTCGCCTGCGGCAGCTTCAATCCCATCACCAAAGGGCACATTCAGATGTTTGAAAGAGCCAGGGATTATCTGCACAAAACTGGAAGGTTTATTGTGATTGGCGGGATTGTCTCCCCTGTCCACGACTCCTATGGAAAACAGGACCCATCTGCACCATGA

MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQDPSAP*