TransCirc

CircID: TC-hsa-P3H4_0003

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr17:41806796~41809834

Gene:

P3H4

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-P3H4_0001
circpedia2: HSA_CIRCpedia_365328

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 1.853699 MS Q-Value:
ORF	1.0
IRES sequence	0.02035
Translation initiation site	0.0
SeqComp	0.83335
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

ATCTCTTTGCAGAGTCCCTGCAGTGCAAGGTGGACTGTGAGGCCAATTTGACCCCCAATGTGGGTGGCTACTTCGTGGACAAGTTCGTGGCCACCATGTACCACTACCTGCAGTTTGCCTACTATAAGTTGAATGATGTGCGCCAGGCTGCCCGCAGCGCCGCCAGCTACATGCTCTTCGACCCCAAGGACAGCGTCATGCAGCAGAACCTGGTGTATTACCGGTTCCACCGGGCTCGCTGGGGCCTGGAAGAGGAGGACTTCCAGCCCCGGGAGGAGGCCATGCTCTACCACAACCAGACCGCCGAGCTGCGGGAGCTGCTGGAGTTCACCCACATGTACCTGCAGTCAGATGATGAG

Exons

exon1:41809834~41809706
exon2:41808004~41807859
exon3:41806879~41806796

IRES sequence

41809711~41809706

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 133
Stop: 40
Length: 267
Translation cycles: 1

ATGATGTGCGCCAGGCTGCCCGCAGCGCCGCCAGCTACATGCTCTTCGACCCCAAGGACAGCGTCATGCAGCAGAACCTGGTGTATTACCGGTTCCACCGGGCTCGCTGGGGCCTGGAAGAGGAGGACTTCCAGCCCCGGGAGGAGGCCATGCTCTACCACAACCAGACCGCCGAGCTGCGGGAGCTGCTGGAGTTCACCCACATGTACCTGCAGTCAGATGATGAGATCTCTTTGCAGAGTCCCTGCAGTGCAAGGTGGACTGTGA

MMCARLPAAPPATCSSTPRTASCSRTWCITGSTGLAGAWKRRTSSPGRRPCSTTTRPPSCGSCWSSPTCTCSQMMRSLCRVPAVQGGL*

Start: 96
Stop: 51
Length: 315
Translation cycles: 1

ATGTACCACTACCTGCAGTTTGCCTACTATAAGTTGAATGATGTGCGCCAGGCTGCCCGCAGCGCCGCCAGCTACATGCTCTTCGACCCCAAGGACAGCGTCATGCAGCAGAACCTGGTGTATTACCGGTTCCACCGGGCTCGCTGGGGCCTGGAAGAGGAGGACTTCCAGCCCCGGGAGGAGGCCATGCTCTACCACAACCAGACCGCCGAGCTGCGGGAGCTGCTGGAGTTCACCCACATGTACCTGCAGTCAGATGATGAGATCTCTTTGCAGAGTCCCTGCAGTGCAAGGTGGACTGTGAGGCCAATTTGA

MYHYLQFAYYKLNDVRQAARSAASYMLFDPKDSVMQQNLVYYRFHRARWGLEEEDFQPREEAMLYHNQTAELRELLEFTHMYLQSDDEISLQSPCSARWTVRPI*