TransCirc

CircID: TC-hsa-PARGP1_0031

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr10:45910549~45916171

Gene:

PARGP1

Gene type:

transcribed_unprocessed_pseudogene

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-PARGP1_0029

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 1.832738 MS Q-Value:
ORF	1.0
IRES sequence	0.26958
Translation initiation site	0.0
SeqComp	0.56316
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

GTACTTGAAGAAACAGAAGCTCAACATTTATATCAGTCCATCTTGCCTGATATGGTGAAAATTGCACTCTGTCTGCCAAATATTTGCACCCAGCCAATACCACTCCTGAAACAGAAGATGAATCATTCCATCACAATGTCGCAGGAACAGATTGCCAGTCTTTTAGCTAATGCTTTCTTCTGCACATTTCCACGATGAAATGCTCAGATGAAATCGGAGTATTCTAGTTACCCAGACATTAACTTCAATCG

Exons

exon1:45916171~45916079
exon2:45910706~45910549

IRES sequence

45916165~45916160
45916149~45916139
45916114~45916109
45916094~45916088
45910687~45910682

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 208
Stop: 58
Length: 102
Translation cycles: 1

ATGAAATCGGAGTATTCTAGTTACCCAGACATTAACTTCAATCGGTACTTGAAGAAACAGAAGCTCAACATTTATATCAGTCCATCTTGCCTGATATGGTGA

MKSEYSSYPDINFNRYLKKQKLNIYISPSCLIW*