CircID: TC-hsa-PDZD4_0001
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chrX:153802477~153802632
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 1.849934
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.01927 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.83067 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
GTGTGGGAACGGGGAGCCTCTGGGGGGCACCTGTTTCCCCAGTGACTCAGAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGA
Exons
- exon1:153802632~153802477
IRES sequence
- 153802536~153802531
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 20
- Stop: 19
- Length: 468
- Translation cycles: 3
CTGGGGGGCACCTGTTTCCCCAGTGACTCAGAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGTGGGAACGGGGAGCCTCTGGGGGGCACCTGTTTCCCCAGTGACTCAGAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGTGGGAACGGGGAGCCTCTGGGGGGCACCTGTTTCCCCAGTGACTCAGAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGTGGGAACGGGGAGCCT
- Start: 81
- Stop: 80
- Length: 468
- Translation cycles: 3
CTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGTGGGAACGGGGAGCCTCTGGGGGGCACCTGTTTCCCCAGTGACTCAGAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGTGGGAACGGGGAGCCTCTGGGGGGCACCTGTTTCCCCAGTGACTCAGAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGTGGGAACGGGGAGCCTCTGGGGGGCACCTGTTTCCCCAGTGACTCAGAGAGAGCAAGACTGCAGGAACGGAGGGGTC