TransCirc

CircID: TC-hsa-PHF8_0023

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chrX:53998843~53999961

Gene:

PHF8

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-PHF8_0036

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 1.897963 MS Q-Value:
ORF	1.0
IRES sequence	0.01927
Translation initiation site	0.0
SeqComp	0.8787
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

GTTTGCGAGAGAACAGGAGACACCCTGCCTCCTACCTGGTCCATGGTGGCAAAGCCTTGAACTTGGCCTTTAGAGCCTGGACAAGGAAAGAA

Exons

exon1:53999961~53999870

IRES sequence

53999874~53999961

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 77
Stop: 60
Length: 168
Translation cycles: 2

CTGGACAAGGAAAGAAGTTTGCGAGAGAACAGGAGACACCCTGCCTCCTACCTGGTCCATGGTGGCAAAGCCTTGAACTTGGCCTTTAGAGCCTGGACAAGGAAAGAAGTTTGCGAGAGAACAGGAGACACCCTGCCTCCTACCTGGTCCATGGTGGCAAAGCCTTGA

LDKERSLRENRRHPASYLVHGGKALNLAFRAWTRKEVCERTGDTLPPTWSMVAKP*

Start: 36
Stop: 60
Length: 117
Translation cycles: 1

CTGGTCCATGGTGGCAAAGCCTTGAACTTGGCCTTTAGAGCCTGGACAAGGAAAGAAGTTTGCGAGAGAACAGGAGACACCCTGCCTCCTACCTGGTCCATGGTGGCAAAGCCTTGA

LVHGGKALNLAFRAWTRKEVCERTGDTLPPTWSMVAKP*