CircID: TC-hsa-PHTF2_0039
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr7:77929153~77951712
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 2.057104
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.47271 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.58439 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
TTCCAGACAGGATTCTGAGAGTGCAAGGCCAGAATCTGAAACAGAAGATGTGTTATGGGAAGACTTGTTACATTGTGCAGAATGCCATTCATCTTGTACCAGTGAGACAGATGTGGAAAATCATCAGATTAATCCATGTGTGAAAAAAGAATATAGAGATGACCCTTTTCATCAGAGTCATTTGCCCTGGCTCCATAGTTCCCACCCAGGATTAGAAAAAATAAGTGCTATAGTATGGGAAGGTAATGATTGTAAGAAAGCAGACATGTCTGTACTTGAAATCAGTGGAATGATAATGAACAGAGTGAACAGCCATATACCAGGAATAGGATACCAGATTTTTGGAAATGCAGTCTCTCTCATACTGGGTTTAACTCCATTTGTTTTCCGACTTTCTCAAGCTACAGACTTGGAACAACTCACAGCACATTCTGCTTCAGAACTTTATGTGATTGCATTTGGTTCTAATGAAGATGTCATAGTTCTTTCTATGGTTATAATAAGTTTTGTGGTTCGCGTGTCTCTTGTGTGGATTTTCTTTTTTTTGCTCTGTGTAGCAGAAAGAACTTATAAACAGCGATTACTTTTTGCAAAACTCTTTGGACATTTAACATCTGCAAGGAGGGCTCGAAAATCTGAGGTTCCTCATTTCCGGTTGAAGAAAGTACAGAATATAAAAATGTGGCTATCTCTCCGTTCCTATCTTAAGCGTCGAGGTCCTCAGCGATCAGTTGATGTAATAGTTTCATCTGCTTTCTTATTGACTATCTCAGTTGTATTTATCTGTTGTGCCCAGCTACTTCATGTACACGAGATCTTCCTTGATTGTCACTACAATTGGGAATTGGTAATCTGGTGCATCTCGTTAACACTTTTTCTCCTAAGATTTGTTACCCTTGGATCAGAAACAAGTAAAAAATATAGTAATACCTCAATATTACTTACTGAACAGATAAACCTCTACTTGAAAATGGAGAAAAAACCTAACAAAAAGGAGGAACTGACACTAGTGAATAATGTTTTAAAACTGGCTACTAAACTGCTAAAG
Exons
- exon1:77929153~77929327
- exon2:77937710~77937838
- exon3:77940030~77940302
- exon4:77940528~77940659
- exon5:77942700~77942786
- exon6:77949678~77949833
- exon7:77951617~77951712
IRES sequence
- 77929195~77929200
- 77929278~77929285
- 77929295~77929308
- 77937750~77937760
- 77937787~77937792
- 77940039~77940045
- 77940087~77940092
- 77940122~77940127
- 77940220~77940230
- 77940293~77940301
- 77940556~77940561
- 77940608~77940613
- 77940621~77940631
- 77949730~77949735
- 77949787~77949792
- 77949794~77949805
- 77949815~77949821
- 77951617~77951622
- 77951641~77951646
- 77951651~77951657
- 77951663~77951668
- 77951675~77951682
- 77951685~77951690
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 266
- Stop: 18
- Length: 801
- Translation cycles: 1
ATGTCTGTACTTGAAATCAGTGGAATGATAATGAACAGAGTGAACAGCCATATACCAGGAATAGGATACCAGATTTTTGGAAATGCAGTCTCTCTCATACTGGGTTTAACTCCATTTGTTTTCCGACTTTCTCAAGCTACAGACTTGGAACAACTCACAGCACATTCTGCTTCAGAACTTTATGTGATTGCATTTGGTTCTAATGAAGATGTCATAGTTCTTTCTATGGTTATAATAAGTTTTGTGGTTCGCGTGTCTCTTGTGTGGATTTTCTTTTTTTTGCTCTGTGTAGCAGAAAGAACTTATAAACAGCGATTACTTTTTGCAAAACTCTTTGGACATTTAACATCTGCAAGGAGGGCTCGAAAATCTGAGGTTCCTCATTTCCGGTTGAAGAAAGTACAGAATATAAAAATGTGGCTATCTCTCCGTTCCTATCTTAAGCGTCGAGGTCCTCAGCGATCAGTTGATGTAATAGTTTCATCTGCTTTCTTATTGACTATCTCAGTTGTATTTATCTGTTGTGCCCAGCTACTTCATGTACACGAGATCTTCCTTGATTGTCACTACAATTGGGAATTGGTAATCTGGTGCATCTCGTTAACACTTTTTCTCCTAAGATTTGTTACCCTTGGATCAGAAACAAGTAAAAAATATAGTAATACCTCAATATTACTTACTGAACAGATAAACCTCTACTTGAAAATGGAGAAAAAACCTAACAAAAAGGAGGAACTGACACTAGTGAATAATGTTTTAAAACTGGCTACTAAACTGCTAAAGTTCCAGACAGGATTCTGA