TransCirc

CircID: TC-hsa-PI4KB_0021

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr1:151315573~151315726

Gene:

PI4KB

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-PI4KB_0033

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 1.969638 MS Q-Value:
ORF	1.0
IRES sequence	0.02035
Translation initiation site	0.0
SeqComp	0.94929
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

GGAGCTGCCCTCCTTGAGCCCGGCCCCTGACACAGGGCTGTCTCCCTCCAAAAGGACTCACCAGCGCTCTAAGTCAGATGCCACTGCCAGCATAAGTCTCAGCAGCAACCTGAAACGAACAGCCAGCAACCCTAAAGTGGAGAATGAGGATGAG

Exons

exon1:151315726~151315573

IRES sequence

151315635~151315630

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 5
Stop: 30
Length: 180
Translation cycles: 1

CTGCCCTCCTTGAGCCCGGCCCCTGACACAGGGCTGTCTCCCTCCAAAAGGACTCACCAGCGCTCTAAGTCAGATGCCACTGCCAGCATAAGTCTCAGCAGCAACCTGAAACGAACAGCCAGCAACCCTAAAGTGGAGAATGAGGATGAGGGAGCTGCCCTCCTTGAGCCCGGCCCCTGA

LPSLSPAPDTGLSPSKRTHQRSKSDATASISLSSNLKRTASNPKVENEDEGAALLEPGP*

Start: 144
Stop: 30
Length: 195
Translation cycles: 2

ATGAGGATGAGGGAGCTGCCCTCCTTGAGCCCGGCCCCTGACACAGGGCTGTCTCCCTCCAAAAGGACTCACCAGCGCTCTAAGTCAGATGCCACTGCCAGCATAAGTCTCAGCAGCAACCTGAAACGAACAGCCAGCAACCCTAAAGTGGAGAATGAGGATGAGGGAGCTGCCCTCCTTGAGCCCGGCCCCTGA

MRMRELPSLSPAPDTGLSPSKRTHQRSKSDATASISLSSNLKRTASNPKVENEDEGAALLEPGP*