CircID: TC-hsa-PITRM1_0035
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr10:3163725~3165474
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 1.808594
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.0173 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.79129 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
AATCTCCTCTCGGTGTATTTGGATGCCACCTTTTTCCCATGTTTACGCGAGCTGGATTTCTGGCAGGAAGGATGGCGGCTGGAACATGAGAATCCGAGCGACCCCCAGACGCCCTTGGTCTTTAAAGGAGTCGTCTTTAATGAGATGAAGGGAGCGTTTACAGACAATGAGAGGATATTCTCCCAGCACCTTCAGAACAGACTTCTTCCTGACCACACGTACTCAGTGGTCTCCGGGGGTGACCCACTGTGCATCCCGGAGCTTACATGGGAGCAGCTTAAGCAGTTTCATGCCACTCACTATCACCCAAGCAATGCTAG
Exons
- exon1:3165474~3165413
- exon2:3165334~3165238
- exon3:3163885~3163725
IRES sequence
- 3165276~3165271
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 145
- Stop: 148
- Length: 324
- Translation cycles: 1
ATGAAGGGAGCGTTTACAGACAATGAGAGGATATTCTCCCAGCACCTTCAGAACAGACTTCTTCCTGACCACACGTACTCAGTGGTCTCCGGGGGTGACCCACTGTGCATCCCGGAGCTTACATGGGAGCAGCTTAAGCAGTTTCATGCCACTCACTATCACCCAAGCAATGCTAGAATCTCCTCTCGGTGTATTTGGATGCCACCTTTTTCCCATGTTTACGCGAGCTGGATTTCTGGCAGGAAGGATGGCGGCTGGAACATGAGAATCCGAGCGACCCCCAGACGCCCTTGGTCTTTAAAGGAGTCGTCTTTAATGAGATGA
- Start: 167
- Stop: 89
- Length: 243
- Translation cycles: 1