CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr2:158475462~158603104
Gene:
Gene type:
protein_coding
Strand:
+
exons:
ORFS:
Evidences
Ribosome/polysome profiling
|
0.0 |
Evidence score: 2.005912
MS Q-Value:
|
ORF
|
1.0 |
IRES sequence
|
0.10047 |
Translation initiation site
|
0.0 |
SeqComp
|
0.90545 |
m6A sites
|
0.0 |
MS evidence
|
0.0 |
circRNA sequence
GAGGAATGCCAGCTCCTGAGCAGGCCTCATTGGTGGAGGAGGGGCAACCACAGACCCGCCAGGAAGCTGCCTCCACTGGCCCAGGCATGGAACCCGAGACCACAGCCACCACTATTCTAGCATCCGTGAAGGAGCAGGAGCTTCAGTTTCAGCGACTCACCCGAGAACTGGAAGTGGAAAGGCAGATTGTTGCCAGTCAGCTAGAAAGATGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGCACCAGCTCAACTGAGAAGTCATTTCCTTGGAGATCAACAG
Exons
- exon1:158533180~158533316
- exon2:158577271~158577383
- exon3:158603070~158603104
IRES sequence
- 158603073~158603078
- 158603093~158603098
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 6
- Stop: 5
- Length: 855
- Translation cycles: 3
ATGCCAGCTCCTGAGCAGGCCTCATTGGTGGAGGAGGGGCAACCACAGACCCGCCAGGAAGCTGCCTCCACTGGCCCAGGCATGGAACCCGAGACCACAGCCACCACTATTCTAGCATCCGTGAAGGAGCAGGAGCTTCAGTTTCAGCGACTCACCCGAGAACTGGAAGTGGAAAGGCAGATTGTTGCCAGTCAGCTAGAAAGATGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGCACCAGCTCAACTGAGAAGTCATTTCCTTGGAGATCAACAGGAGGAATGCCAGCTCCTGAGCAGGCCTCATTGGTGGAGGAGGGGCAACCACAGACCCGCCAGGAAGCTGCCTCCACTGGCCCAGGCATGGAACCCGAGACCACAGCCACCACTATTCTAGCATCCGTGAAGGAGCAGGAGCTTCAGTTTCAGCGACTCACCCGAGAACTGGAAGTGGAAAGGCAGATTGTTGCCAGTCAGCTAGAAAGATGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGCACCAGCTCAACTGAGAAGTCATTTCCTTGGAGATCAACAGGAGGAATGCCAGCTCCTGAGCAGGCCTCATTGGTGGAGGAGGGGCAACCACAGACCCGCCAGGAAGCTGCCTCCACTGGCCCAGGCATGGAACCCGAGACCACAGCCACCACTATTCTAGCATCCGTGAAGGAGCAGGAGCTTCAGTTTCAGCGACTCACCCGAGAACTGGAAGTGGAAAGGCAGATTGTTGCCAGTCAGCTAGAAAGATGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGCACCAGCTCAACTGAGAAGTCATTTCCTTGGAGATCAACAGGAGGA
MPAPEQASLVEEGQPQTRQEAASTGPGMEPETTATTILASVKEQELQFQRLTRELEVERQIVASQLERCRLGAESPSIASTSSTEKSFPWRSTGGMPAPEQASLVEEGQPQTRQEAASTGPGMEPETTATTILASVKEQELQFQRLTRELEVERQIVASQLERCRLGAESPSIASTSSTEKSFPWRSTGGMPAPEQASLVEEGQPQTRQEAASTGPGMEPETTATTILASVKEQELQFQRLTRELEVERQIVASQLERCRLGAESPSIASTSSTEKSFPWRSTGG