CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr11:45181761~45183123
Gene:
Gene type:
protein_coding
Strand:
+
exons:
ORFS:
Evidences
Ribosome/polysome profiling
|
0.0 |
Evidence score: 2.753576
MS Q-Value:
|
ORF
|
1.0 |
IRES sequence
|
0.01763 |
Translation initiation site
|
0.0 |
SeqComp
|
0.73595 |
m6A sites
|
1.0 |
MS evidence
|
0.0 |
circRNA sequence
GACAGAATGACCGAGAACATGAAGGAGTGCTTGGCCCAGACCAATGCAGCCGTGGGGGATATGGTGACGGTGGTGAAGACGGAGGTCTGCTCACCACTCCGAGACCAGGAGTATGGCCAGCCCTGCTCTAGGAGACCGGACTCCTCGGCCATGGAAGTTGAGCCCAAGAAACTGAAGGGGAAGCGCGACCTCATCGTGCCCAAAAGCTTCCAGCAAGTGGACTTCTGGTTCTGTGAGTCCTGCCAGGAGTACTTCGTGGATGAATGCCCAAACCATGGCCCCCCGGTGTTTGTGTCTGACACACCGGTGCCCGTGGGCATCCCAGACCGGGCGGCGCTCACCATCCCACAGGGCATGGAGGTGGTCAAGGACACTAGTGGAGAGAGTGACGTGCGATGTGTAAACGAGGTCATCCCCAAGGGCCACATCTTCGGCCCCTATGAGGGGCAGATCTCCACCCAGGACAAATCAGCTGGCTTCTTCTCCTGGCTG
Exons
- exon1:45181761~45181885
- exon2:45182246~45182349
- exon3:45182861~45183123
m6A sites
- 45182930
- 45182957
- 45183002
- 45183020
- 45183035
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 7
- Stop: 6
- Length: 1476
- Translation cycles: 3
ATGACCGAGAACATGAAGGAGTGCTTGGCCCAGACCAATGCAGCCGTGGGGGATATGGTGACGGTGGTGAAGACGGAGGTCTGCTCACCACTCCGAGACCAGGAGTATGGCCAGCCCTGCTCTAGGAGACCGGACTCCTCGGCCATGGAAGTTGAGCCCAAGAAACTGAAGGGGAAGCGCGACCTCATCGTGCCCAAAAGCTTCCAGCAAGTGGACTTCTGGTTCTGTGAGTCCTGCCAGGAGTACTTCGTGGATGAATGCCCAAACCATGGCCCCCCGGTGTTTGTGTCTGACACACCGGTGCCCGTGGGCATCCCAGACCGGGCGGCGCTCACCATCCCACAGGGCATGGAGGTGGTCAAGGACACTAGTGGAGAGAGTGACGTGCGATGTGTAAACGAGGTCATCCCCAAGGGCCACATCTTCGGCCCCTATGAGGGGCAGATCTCCACCCAGGACAAATCAGCTGGCTTCTTCTCCTGGCTGGACAGAATGACCGAGAACATGAAGGAGTGCTTGGCCCAGACCAATGCAGCCGTGGGGGATATGGTGACGGTGGTGAAGACGGAGGTCTGCTCACCACTCCGAGACCAGGAGTATGGCCAGCCCTGCTCTAGGAGACCGGACTCCTCGGCCATGGAAGTTGAGCCCAAGAAACTGAAGGGGAAGCGCGACCTCATCGTGCCCAAAAGCTTCCAGCAAGTGGACTTCTGGTTCTGTGAGTCCTGCCAGGAGTACTTCGTGGATGAATGCCCAAACCATGGCCCCCCGGTGTTTGTGTCTGACACACCGGTGCCCGTGGGCATCCCAGACCGGGCGGCGCTCACCATCCCACAGGGCATGGAGGTGGTCAAGGACACTAGTGGAGAGAGTGACGTGCGATGTGTAAACGAGGTCATCCCCAAGGGCCACATCTTCGGCCCCTATGAGGGGCAGATCTCCACCCAGGACAAATCAGCTGGCTTCTTCTCCTGGCTGGACAGAATGACCGAGAACATGAAGGAGTGCTTGGCCCAGACCAATGCAGCCGTGGGGGATATGGTGACGGTGGTGAAGACGGAGGTCTGCTCACCACTCCGAGACCAGGAGTATGGCCAGCCCTGCTCTAGGAGACCGGACTCCTCGGCCATGGAAGTTGAGCCCAAGAAACTGAAGGGGAAGCGCGACCTCATCGTGCCCAAAAGCTTCCAGCAAGTGGACTTCTGGTTCTGTGAGTCCTGCCAGGAGTACTTCGTGGATGAATGCCCAAACCATGGCCCCCCGGTGTTTGTGTCTGACACACCGGTGCCCGTGGGCATCCCAGACCGGGCGGCGCTCACCATCCCACAGGGCATGGAGGTGGTCAAGGACACTAGTGGAGAGAGTGACGTGCGATGTGTAAACGAGGTCATCCCCAAGGGCCACATCTTCGGCCCCTATGAGGGGCAGATCTCCACCCAGGACAAATCAGCTGGCTTCTTCTCCTGGCTGGACAGA
MTENMKECLAQTNAAVGDMVTVVKTEVCSPLRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSAGFFSWLDRMTENMKECLAQTNAAVGDMVTVVKTEVCSPLRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSAGFFSWLDRMTENMKECLAQTNAAVGDMVTVVKTEVCSPLRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSAGFFSWLDR