CircID: TC-hsa-RBM6_0010
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr3:49962576~50054395
Xref:
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 2.975905
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.30518 | |
| Translation initiation site | 1.0 | |
| SeqComp | 0.67073 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
GTACTGCTATAACCAGAATTTGGTAGAAAAAGGATTTACTTGTTGGGGCCCTCTTGATAAAAAGAGATGTGGGGGGATTCTCGACCTGCTAACAGAACTGGACCTTTTCGGATCAAGATTATAGGACCGGCCCAAGTGAGGAGAAACCCAGCAGGCTTATTCGATTAAGTGGGGTACCTGAAGATGCCACAAAAGAAGAGATTCTTAATGCTTTTCGGACTCCTGATGGCATGCCTGTAAAGAACTTGCAGTTGAAGGAGTATAACACAGGGAACTCTAATGATCCAGGACAAAGAAGTTACCCTGGAGTATGTATCAAGCCTGGATTTTTGGTACTGCAAACGATGTAAGGCAAACATTGGTGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAG
Exons
- exon1:49962576~49962685
- exon2:49972059~49972148
- exon3:49975323~49975392
- exon4:50048245~50048319
- exon5:50054335~50054395
IRES sequence
- 49962632~49962640
- 49972060~49972071
- 49972107~49972112
- 49972137~49972147
- 50048267~50048272
- 50048289~50048295
- 50054343~50054349
Translation initiation site
- 49962593~49962595
- 49962642~49962644
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 280
- Stop: 26
- Length: 153
- Translation cycles: 1
- Start: 311
- Stop: 12
- Length: 108
- Translation cycles: 1