CircID: TC-hsa-RP1-283E3_0006
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr1:1719358~1722831
Xref:
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 3.19185
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.3745 | |
| Translation initiation site | 1.0 | |
| SeqComp | 0.81735 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
TGTTTTAACTCAAATGGGTGATGAAAAGGACTCTTGGAAAGTGAAAACTTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGAACAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAAATGTAAGCCATATTTTTTTAAGTAAGTGGTTTTCTTAAAGGAGATTTAATTTCTTTGCCCTCATTTTTCCATTAGAACAACGCTTCTTCGGTGAAGTTCTTTTGTACTTCCAAATGTCGCAGTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGGAGGGGGAGCTGAGAGATCACTGCATGGAGATCACAATAAGGAACTCCCCGTATAGAAGAGAAGACTCAATGGAAGACAGAGGAGAAGAAGATGATTCTTTGGCCATCAAACCACCCCAGCAAATGTCTCGGAAAGAAAAAGTTCATCACAGAAAAGATGAAAAGAGAAAAGAAAAAT
Exons
- exon1:1722831~1722588
- exon2:1721711~1721596
- exon3:1719455~1719358
IRES sequence
- 1722775~1722770
- 1722763~1722758
- 1722728~1722720
- 1722715~1722708
- 1722699~1722694
- 1722670~1722661
- 1722640~1722635
- 1721649~1721644
- 1721640~1721635
- 1721621~1721611
- 1719452~1719444
- 1719383~1719378
- 1719375~1719370
- 1719368~1722831
Translation initiation site
- 1722818~1722816
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 236
- Stop: 8
- Length: 231
- Translation cycles: 1