CircID: TC-hsa-RP11-345P4_0001

CircRNA information
Taxonomy:
Genome Version:
hg38 
Location:
chr1:1614263~1614600 
Gene:
Gene type:
transcribed_processed_pseudogene
Strand:
-
exons:
ORFS:
Evidences
Ribosome/polysome profiling 0.0
Evidence score: 2.200103
MS Q-Value:
ORF 1.0
IRES sequence 0.28623
Translation initiation site 0.0
SeqComp 0.91387
m6A sites 0.0
MS evidence 0.0
Other evidences Upload
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Structure
IRES
m6A
TIS
circRNA sequence
GCTCTCCAGGACAAGTGAGTTAATCTGGGAATCGCAGGGGGTTGCAGCCTAGGCTGTTCGTGCCATGACAGATCATAGGCCTATCTGAGAGGGCCGGGCGAAGGGGAAAATACAGATGAGCTCACAAAAGTTGTTTTGTAACAAAAACCACTGGCTGTGGGCGCTTGCTGCAGGAGTGGGCGTTAGCTTGTTGTTGGAGAGAGCCTTACCAGGCCGACGTCCTTGTGCAAGCTGCTTATCTAGAATACTGCAGTCCTGAGGAATTTCCCTGCAGTAAGTCCGGTTACAGGCAAACGTGCAGGACGTGCAGGAGCGTCTTGTGAGGAGGCCTGCTGCAG
Exons
  • exon1:1614600~1614263
IRES sequence
  • 1614580~1614575
  • 1614494~1614487
  • 1614477~1614472
  • 1614460~1614454
  • 1614357~1614351
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
  • Start: 256
  • Stop: 52
  • Length: 135
  • Translation cycles: 1
CTGAGGAATTTCCCTGCAGTAAGTCCGGTTACAGGCAAACGTGCAGGACGTGCAGGAGCGTCTTGTGAGGAGGCCTGCTGCAGGCTCTCCAGGACAAGTGAGTTAATCTGGGAATCGCAGGGGGTTGCAGCCTAG
LRNFPAVSPVTGKRAGRAGASCEEACCRLSRTSELIWESQGVAA*
  • Start: 296
  • Stop: 23
  • Length: 66
  • Translation cycles: 1
GTGCAGGACGTGCAGGAGCGTCTTGTGAGGAGGCCTGCTGCAGGCTCTCCAGGACAAGTGAGTTAA
VQDVQERLVRRPAAGSPGQVS*