TransCirc

CircID: TC-hsa-RP11-356N1_0003

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr1:108066857~108071637

Gene:

RP11-356N1

Gene type:

lincRNA

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-RP11-356N1_0004

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 1.978053 MS Q-Value:
ORF	1.0
IRES sequence	0.02035
Translation initiation site	0.0
SeqComp	0.9577
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

TGACCACTCCCTGATATGCTGCAGATGCAATTGAGTAGCAGCTTCATTCCACATTTCTCCAACATCTTTCATGGTGAGGTCAAGAGCATATTCAAAACCATGTGTGGCTCAGTCCAACTGGAGAGACCAAGTCAAAGAGCCTCATTTCCATAAG

Exons

exon1:108071484~108071637

IRES sequence

108071633~108071484

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 71
Stop: 3
Length: 87
Translation cycles: 1

ATGGTGAGGTCAAGAGCATATTCAAAACCATGTGTGGCTCAGTCCAACTGGAGAGACCAAGTCAAAGAGCCTCATTTCCATAAGTGA

MVRSRAYSKPCVAQSNWRDQVKEPHFHK*

Start: 102
Stop: 34
Length: 87
Translation cycles: 1

GTGTGGCTCAGTCCAACTGGAGAGACCAAGTCAAAGAGCCTCATTTCCATAAGTGACCACTCCCTGATATGCTGCAGATGCAATTGA

VWLSPTGETKSKSLISISDHSLICCRCN*