CircID: TC-hsa-RP11-468E2_0006
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr14:24163940~24166251
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 2.960176
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.01763 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.94255 | |
| m6A sites | 1.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
CAGCCCTGAGCCACAGGAAGTTACAGACACAACTGAGGCCCCCTTTCAAGGGGATCAGAGGTCCCTGGAGTTTCTGCTTCCTCCAGAGCCAGACTACTCACTGCTGCTCACCTTCATCTACAACGGGCGCGTGGTGGGCGAGGCCCAGGTGCAAAGCCTGGATTGCCGCCTTGTGGCTGAGCCCTCAGGCTCTGAGAGCAGCATGGAGCAGGTGCTGTTCCCCAAGCCTGGCCCACTGGAGCCCACGCAGCGCCTGCTGAGCCAGCTTGAGAGGGGCATCCTAGTGGCCAGCAACCCCCGAGGCCTCTTCGTGCAGCGCCTTTGCCCCATCCCCATCTCCTGGAATGCACCCCAGGCTCCACCTGGGCCAGGCCCGCATCTGCTGCCCAGCAACGAGTGCGTGGAGCTCTTCAGAACCGCCTACTTCTGCAGAGACTTGGTCAGGTACTTTCAGGGCCTGGGCCCCCCACCGAAGTTCCAGGTAACACTGAATTTCTGGGAAGAGAGCCATGGCTCCAGCCATACTCCACAGAATCTTATCACAGTGAAGATGGAGCAGGCCTTTGCCCGATACTTGCTGGAGCAGACTCCAGAGCAGCAGGCAGCCATTCTGTCCCTGGTGTAGAGCCTGGGGGACCCATCTTCCACCTCACCTCTTTGTTCTTCCTGTCTCCTTTGAA
Exons
- exon1:24163940~24163959
- exon2:24164063~24164134
- exon3:24164614~24164955
- exon4:24165847~24165962
- exon5:24166122~24166251
m6A sites
- 24164815
IRES sequence
- 24164073~24164078
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 340
- Stop: 625
- Length: 966
- Translation cycles: 1
CTGGAATGCACCCCAGGCTCCACCTGGGCCAGGCCCGCATCTGCTGCCCAGCAACGAGTGCGTGGAGCTCTTCAGAACCGCCTACTTCTGCAGAGACTTGGTCAGGTACTTTCAGGGCCTGGGCCCCCCACCGAAGTTCCAGGTAACACTGAATTTCTGGGAAGAGAGCCATGGCTCCAGCCATACTCCACAGAATCTTATCACAGTGAAGATGGAGCAGGCCTTTGCCCGATACTTGCTGGAGCAGACTCCAGAGCAGCAGGCAGCCATTCTGTCCCTGGTGTAGAGCCTGGGGGACCCATCTTCCACCTCACCTCTTTGTTCTTCCTGTCTCCTTTGAACAGCCCTGAGCCACAGGAAGTTACAGACACAACTGAGGCCCCCTTTCAAGGGGATCAGAGGTCCCTGGAGTTTCTGCTTCCTCCAGAGCCAGACTACTCACTGCTGCTCACCTTCATCTACAACGGGCGCGTGGTGGGCGAGGCCCAGGTGCAAAGCCTGGATTGCCGCCTTGTGGCTGAGCCCTCAGGCTCTGAGAGCAGCATGGAGCAGGTGCTGTTCCCCAAGCCTGGCCCACTGGAGCCCACGCAGCGCCTGCTGAGCCAGCTTGAGAGGGGCATCCTAGTGGCCAGCAACCCCCGAGGCCTCTTCGTGCAGCGCCTTTGCCCCATCCCCATCTCCTGGAATGCACCCCAGGCTCCACCTGGGCCAGGCCCGCATCTGCTGCCCAGCAACGAGTGCGTGGAGCTCTTCAGAACCGCCTACTTCTGCAGAGACTTGGTCAGGTACTTTCAGGGCCTGGGCCCCCCACCGAAGTTCCAGGTAACACTGAATTTCTGGGAAGAGAGCCATGGCTCCAGCCATACTCCACAGAATCTTATCACAGTGAAGATGGAGCAGGCCTTTGCCCGATACTTGCTGGAGCAGACTCCAGAGCAGCAGGCAGCCATTCTGTCCCTGGTGTAG
LECTPGSTWARPASAAQQRVRGALQNRLLLQRLGQVLSGPGPPTEVPGNTEFLGREPWLQPYSTESYHSEDGAGLCPILAGADSRAAGSHSVPGVEPGGPIFHLTSLFFLSPLNSPEPQEVTDTTEAPFQGDQRSLEFLLPPEPDYSLLLTFIYNGRVVGEAQVQSLDCRLVAEPSGSESSMEQVLFPKPGPLEPTQRLLSQLERGILVASNPRGLFVQRLCPIPISWNAPQAPPGPGPHLLPSNECVELFRTAYFCRDLVRYFQGLGPPPKFQVTLNFWEESHGSSHTPQNLITVKMEQAFARYLLEQTPEQQAAILSLV*