TransCirc

CircID: TC-hsa-RP11-849H4_0012

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr11:72015663~72016092

Gene:

RP11-849H4

Gene type:

antisense

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-NUMA1_0053

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 2.030606 MS Q-Value:
ORF	1.0
IRES sequence	0.03061
Translation initiation site	0.0
SeqComp	1.0
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

CCTTCTCCTTCTCCAGTGCCTCCAGCTGCTTGAGAGCCGCATCCCGCTCCCTTAAGGAGGCCTCTCGCTCCTCTGCAGCAGTGGCCAGTTGCTGGGCATGGTCCTGCCTAGTTGCCTCCTGCTTCTCCGCTACCTCCTTCAACTGCTGCTCCTTCTGCTTCAGGCTACTGCTTAGCTGCTCCACCTGGTGGCGGAGGCCCTGGGAGGCCTGTTCTTGCTGTTGGAGGGTCTGTGCTAGCTGGGCCTGCTTCTCTTTGGCCTGCTGCTTCAGGCCAGCCAGTTCTTGATCCTGTTGCTGGATGGTGGCATTGAGTGTGGTGAGCTCAGAGGTCAGAGAGGCCACCTGGGCAGTCAACCGGGCCCCATGAGCCTGGGAGGCCTGCTCCAGCTCTTCCTTGGCCTGGCTGAGGTTGGAGATGGAGCTCTGCAG

Exons

exon1:72015663~72016092

IRES sequence

72016075~72016080

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 365
Stop: 33
Length: 99
Translation cycles: 1

ATGAGCCTGGGAGGCCTGCTCCAGCTCTTCCTTGGCCTGGCTGAGGTTGGAGATGGAGCTCTGCAGCCTTCTCCTTCTCCAGTGCCTCCAGCTGCTTGA

MSLGGLLQLFLGLAEVGDGALQPSPSPVPPAA*

Start: 417
Stop: 55
Length: 69
Translation cycles: 1

ATGGAGCTCTGCAGCCTTCTCCTTCTCCAGTGCCTCCAGCTGCTTGAGAGCCGCATCCCGCTCCCTTAA

MELCSLLLLQCLQLLESRIPLP*