TransCirc

CircID: TC-hsa-RRP9_0002

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr3:51936257~51936555

Gene:

RRP9

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-RRP9_0005

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 1.867024 MS Q-Value:
ORF	1.0
IRES sequence	0.01927
Translation initiation site	0.0
SeqComp	0.84776
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

GGAGCGTGGAGAGTGGACGGAAGCTGCATGTGATTCCTCGAGCCAAGAAGGGTGCCGAGGGAAAGCCCCCTGGCCACAGCAGCCACGTCCTCTGCATGGCCATCTCCTCCGACGGCAAGTACCTTGCCTCTGGTGACCGCAGCAAGCTCATTCTCATTTGGGAGGCCCAGAGCTGCCAGCACTTGTACACCTTCACAGGACACCGGGATGCAGTGTCG

Exons

exon1:51936555~51936431
exon2:51936349~51936257

IRES sequence

51936511~51936506

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 208
Stop: 136
Length: 147
Translation cycles: 1

ATGCAGTGTCGGGAGCGTGGAGAGTGGACGGAAGCTGCATGTGATTCCTCGAGCCAAGAAGGGTGCCGAGGGAAAGCCCCCTGGCCACAGCAGCCACGTCCTCTGCATGGCCATCTCCTCCGACGGCAAGTACCTTGCCTCTGGTGA

MQCRERGEWTEAACDSSSQEGCRGKAPWPQQPRPLHGHLLRRQVPCLW*

Start: 173
Stop: 33
Length: 297
Translation cycles: 2

CTGCCAGCACTTGTACACCTTCACAGGACACCGGGATGCAGTGTCGGGAGCGTGGAGAGTGGACGGAAGCTGCATGTGATTCCTCGAGCCAAGAAGGGTGCCGAGGGAAAGCCCCCTGGCCACAGCAGCCACGTCCTCTGCATGGCCATCTCCTCCGACGGCAAGTACCTTGCCTCTGGTGACCGCAGCAAGCTCATTCTCATTTGGGAGGCCCAGAGCTGCCAGCACTTGTACACCTTCACAGGACACCGGGATGCAGTGTCGGGAGCGTGGAGAGTGGACGGAAGCTGCATGTGA

LPALVHLHRTPGCSVGSVESGRKLHVIPRAKKGAEGKPPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGAWRVDGSCM*

Start: 96
Stop: 33
Length: 156
Translation cycles: 1

ATGGCCATCTCCTCCGACGGCAAGTACCTTGCCTCTGGTGACCGCAGCAAGCTCATTCTCATTTGGGAGGCCCAGAGCTGCCAGCACTTGTACACCTTCACAGGACACCGGGATGCAGTGTCGGGAGCGTGGAGAGTGGACGGAAGCTGCATGTGA

MAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGAWRVDGSCM*