TransCirc

CircID: TC-hsa-SECISBP2L_0033

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr15:49012648~49012817

Gene:

SECISBP2L

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-SECISBP2L_0073
circpedia2: HSA_CIRCpedia_130628

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 1.83192 MS Q-Value:
ORF	1.0
IRES sequence	0.27539
Translation initiation site	0.0
SeqComp	0.55653
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

TGGTTACTGCAGCTTCTTTTCACACTAAAGACTCTACTAATAGAAAACCTTTAACCAAAAGTCAGCCCTGTTTGACATCCTTTAATTCTGTGGACATTGCTTCTTCTAAAGCAAAAAAAGGAAAAGAGAAGGAAATTGCAAAACTAAAACGACCCACAGCACTTAAAAAG

Exons

exon1:49012817~49012648

IRES sequence

49012791~49012786
49012779~49012774
49012745~49012740
49012706~49012699
49012696~49012691
49012654~49012649

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 170
Stop: 54
Length: 225
Translation cycles: 2

GTGGTTACTGCAGCTTCTTTTCACACTAAAGACTCTACTAATAGAAAACCTTTAACCAAAAGTCAGCCCTGTTTGACATCCTTTAATTCTGTGGACATTGCTTCTTCTAAAGCAAAAAAAGGAAAAGAGAAGGAAATTGCAAAACTAAAACGACCCACAGCACTTAAAAAGTGGTTACTGCAGCTTCTTTTCACACTAAAGACTCTACTAATAGAAAACCTTTAA

VVTAASFHTKDSTNRKPLTKSQPCLTSFNSVDIASSKAKKGKEKEIAKLKRPTALKKWLLQLLFTLKTLLIENL*

Start: 90
Stop: 54
Length: 135
Translation cycles: 1

GTGGACATTGCTTCTTCTAAAGCAAAAAAAGGAAAAGAGAAGGAAATTGCAAAACTAAAACGACCCACAGCACTTAAAAAGTGGTTACTGCAGCTTCTTTTCACACTAAAGACTCTACTAATAGAAAACCTTTAA

VDIASSKAKKGKEKEIAKLKRPTALKKWLLQLLFTLKTLLIENL*