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CircID: TC-hsa-SLC35D1_0001

CircRNA information
Taxonomy:
Homo sapiens 
Genome Version:
hg38 
Location:
chr1:66999406~66999548 
Gene:
SLC35D1
Gene type:
protein_coding
Strand:
-
exons:
1
ORFS:
2
Xref:
circAtlas: hsa-SLC35D1_0025
Evidences
Ribosome/polysome profiling 0.0
Evidence score: 1.913542
MS Q-Value:
ORF 1.0
IRES sequence 0.30201
Translation initiation site 0.0
SeqComp 0.61153
m6A sites 0.0
MS evidence 0.0
Other evidences Upload
File Author Date
Structure
IRES
m6A
TIS
circRNA sequence
GTGTTAGCTTCTCACAGTATTTTTTCATTTTAGAGTCTATTTACCAAATGACCATTTTTAGTGTTAAAAGGTACTGAGGAATTGAGGTATGTAAATCAGGTGACATAAACATGAAAATTATGTGCCTAAATATTTTTGTAATG
Exons
  • exon1:66999548~66999406
IRES sequence
  • 66999531~66999526
  • 66999448~66999437
  • 66999435~66999428
  • 66999422~66999413
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
  • Start: 122
  • Stop: 77
  • Length: 99
  • Translation cycles: 1
GTGCCTAAATATTTTTGTAATGGTGTTAGCTTCTCACAGTATTTTTTCATTTTAGAGTCTATTTACCAAATGACCATTTTTAGTGTTAAAAGGTACTGA
VPKYFCNGVSFSQYFFILESIYQMTIFSVKRY*
  • Start: 111
  • Stop: 33
  • Length: 66
  • Translation cycles: 1
ATGAAAATTATGTGCCTAAATATTTTTGTAATGGTGTTAGCTTCTCACAGTATTTTTTCATTTTAG
MKIMCLNIFVMVLASHSIFSF*