TransCirc

CircID: TC-hsa-SORCS1_0005

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr10:106579369~106587660

Gene:

SORCS1

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-SORCS1_0095

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 1.867824 MS Q-Value:
ORF	1.0
IRES sequence	0.0173
Translation initiation site	0.0
SeqComp	0.85052
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

CCCCCCTGGTGGACCTCACTCCAACCCACAGTGGATCTGCCATGCTGATGCTGCTCTCAGTGGTGTTTGTGGGGCTGGCAGTGTTCGTCATCTACAAGTTTAAAAG

Exons

exon1:106579474~106579369

IRES sequence

106579376~106579371

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 67
Stop: 103
Length: 249
Translation cycles: 2

TTGTGGGGCTGGCAGTGTTCGTCATCTACAAGTTTAAAAGCCCCCCTGGTGGACCTCACTCCAACCCACAGTGGATCTGCCATGCTGATGCTGCTCTCAGTGGTGTTTGTGGGGCTGGCAGTGTTCGTCATCTACAAGTTTAAAAGCCCCCCTGGTGGACCTCACTCCAACCCACAGTGGATCTGCCATGCTGATGCTGCTCTCAGTGGTGTTTGTGGGGCTGGCAGTGTTCGTCATCTACAAGTTTAA

LWGWQCSSSTSLKAPLVDLTPTHSGSAMLMLLSVVFVGLAVFVIYKFKSPPGGPHSNPQWICHADAALSGVCGAGSVRHLQV*

Start: 42
Stop: 103
Length: 168
Translation cycles: 1

ATGCTGATGCTGCTCTCAGTGGTGTTTGTGGGGCTGGCAGTGTTCGTCATCTACAAGTTTAAAAGCCCCCCTGGTGGACCTCACTCCAACCCACAGTGGATCTGCCATGCTGATGCTGCTCTCAGTGGTGTTTGTGGGGCTGGCAGTGTTCGTCATCTACAAGTTTAA

MLMLLSVVFVGLAVFVIYKFKSPPGGPHSNPQWICHADAALSGVCGAGSVRHLQV*