CircID: TC-hsa-SRRM2_0022
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr16:2759027~2760215
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 1.78068
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.22433 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.55635 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
CTCAAAGAAGAAGAAGCACAGGTCAGAATCTGAGTCCAAGAAACGTAAGCATAGGTCTCCCACTCCAAAGAGCAAACGTAAATCTAAGGACAAAAAGCGAAAGCGGTCTCGAAGTACAACACCAGCCCCCAAGAGCCGCCGGGCCCACCGTTCAACTTCTGCTGACTCTGCTTCCTCCTCCGATACTTCCCGCAGTCG
Exons
- exon1:2759027~2759047
- exon2:2759140~2759172
- exon3:2759352~2759402
- exon4:2759569~2759661
IRES sequence
- 2759031~2759042
- 2759387~2759393
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 30
- Stop: 29
- Length: 594
- Translation cycles: 3
CTGAGTCCAAGAAACGTAAGCATAGGTCTCCCACTCCAAAGAGCAAACGTAAATCTAAGGACAAAAAGCGAAAGCGGTCTCGAAGTACAACACCAGCCCCCAAGAGCCGCCGGGCCCACCGTTCAACTTCTGCTGACTCTGCTTCCTCCTCCGATACTTCCCGCAGTCGCTCAAAGAAGAAGAAGCACAGGTCAGAATCTGAGTCCAAGAAACGTAAGCATAGGTCTCCCACTCCAAAGAGCAAACGTAAATCTAAGGACAAAAAGCGAAAGCGGTCTCGAAGTACAACACCAGCCCCCAAGAGCCGCCGGGCCCACCGTTCAACTTCTGCTGACTCTGCTTCCTCCTCCGATACTTCCCGCAGTCGCTCAAAGAAGAAGAAGCACAGGTCAGAATCTGAGTCCAAGAAACGTAAGCATAGGTCTCCCACTCCAAAGAGCAAACGTAAATCTAAGGACAAAAAGCGAAAGCGGTCTCGAAGTACAACACCAGCCCCCAAGAGCCGCCGGGCCCACCGTTCAACTTCTGCTGACTCTGCTTCCTCCTCCGATACTTCCCGCAGTCGCTCAAAGAAGAAGAAGCACAGGTCAGAAT