CircID: TC-hsa-SSU72_0004
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr1:1564605~1564916
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 1.818034
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.13205 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.68598 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
CAAACGGGGATTCAGCGTCCGATCCTTTGGAACAGGGACTCACGTGAAGCTTCCAGGACCAGCTCCCGACAAGCCCAATGTTTATGATTTCAAAACCACATATGACCAGATGTACAATGATCTTCTTAGGAAAGACAAAGAACT
Exons
- exon1:1564916~1564773
IRES sequence
- 1564819~1564814
- 1564786~1564781
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 110
- Stop: 109
- Length: 432
- Translation cycles: 3
ATGTACAATGATCTTCTTAGGAAAGACAAAGAACTCAAACGGGGATTCAGCGTCCGATCCTTTGGAACAGGGACTCACGTGAAGCTTCCAGGACCAGCTCCCGACAAGCCCAATGTTTATGATTTCAAAACCACATATGACCAGATGTACAATGATCTTCTTAGGAAAGACAAAGAACTCAAACGGGGATTCAGCGTCCGATCCTTTGGAACAGGGACTCACGTGAAGCTTCCAGGACCAGCTCCCGACAAGCCCAATGTTTATGATTTCAAAACCACATATGACCAGATGTACAATGATCTTCTTAGGAAAGACAAAGAACTCAAACGGGGATTCAGCGTCCGATCCTTTGGAACAGGGACTCACGTGAAGCTTCCAGGACCAGCTCCCGACAAGCCCAATGTTTATGATTTCAAAACCACATATGACCAG