TransCirc

CircID: TC-hsa-SUPT5H_0001

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr19:39445441~39445965

Gene:

SUPT5H

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-SUPT5H_0013
circpedia2: HSA_CIRCpedia_87305

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 2.706993 MS Q-Value:
ORF	1.0
IRES sequence	0.01763
Translation initiation site	1.0
SeqComp	0.68936
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

ATGTCGGCCCCGCACTCCGCCCAGGCCAGCCCTGCCTCTCTCAAGATGGCGACCTGGAAGTGCGTCGCCCGTGCCAGCCCCGGAAATCTCGTGTTAGGCGAGGTCAACGGGTAGGTTCTCGCGAGAGGACCCGTCAGCCCCAGTCAGGCGTCGTGCGAACAGCAGCTGGTACCGAAGGCGGAGGTGGAGCCCGAGAGGGAACCAGCGGGGAAACTGAGGCTCGGGGTGGAGCGCAGGATTGTGGGACGCGCCAAGGCTGCTGTCTTTCCCAGCAGCAGCGGAAGATGTCGGACAGCGAGGACAGCAACTTTTCCGAGGAGGAGGACAGCGAGCGCAGCAGTGACGGCGAGGAGGCCGAG

Exons

exon1:39445441~39445637
exon2:39445804~39445965

IRES sequence

39445818~39445823

Translation initiation site

39445891~39445893

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 166
Stop: 97
Length: 291
Translation cycles: 1

CTGGTACCGAAGGCGGAGGTGGAGCCCGAGAGGGAACCAGCGGGGAAACTGAGGCTCGGGGTGGAGCGCAGGATTGTGGGACGCGCCAAGGCTGCTGTCTTTCCCAGCAGCAGCGGAAGATGTCGGACAGCGAGGACAGCAACTTTTCCGAGGAGGAGGACAGCGAGCGCAGCAGTGACGGCGAGGAGGCCGAGATGTCGGCCCCGCACTCCGCCCAGGCCAGCCCTGCCTCTCTCAAGATGGCGACCTGGAAGTGCGTCGCCCGTGCCAGCCCCGGAAATCTCGTGTTAG

LVPKAEVEPEREPAGKLRLGVERRIVGRAKAAVFPSSSGRCRTARTATFPRRRTASAAVTARRPRCRPRTPPRPALPLSRWRPGSASPVPAPEISC*

Start: 285
Stop: 114
Length: 189
Translation cycles: 1

ATGTCGGACAGCGAGGACAGCAACTTTTCCGAGGAGGAGGACAGCGAGCGCAGCAGTGACGGCGAGGAGGCCGAGATGTCGGCCCCGCACTCCGCCCAGGCCAGCCCTGCCTCTCTCAAGATGGCGACCTGGAAGTGCGTCGCCCGTGCCAGCCCCGGAAATCTCGTGTTAGGCGAGGTCAACGGGTAG

MSDSEDSNFSEEEDSERSSDGEEAEMSAPHSAQASPASLKMATWKCVARASPGNLVLGEVNG*