CircID: TC-hsa-TLE4_0014
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr9:79612656~79627448
Xref:
circAtlas: hsa-TLE4_0004
circBase: hsa_circ_0087283
circRNADb: hsa_circ_25025
deepbase2: hsa-circRNA7702-14
circpedia2: HSA_CIRCpedia_64484
circBase: hsa_circ_0087283
circRNADb: hsa_circ_25025
deepbase2: hsa-circRNA7702-14
circpedia2: HSA_CIRCpedia_64484
Evidences
| Ribosome/polysome profiling | 0.33333 |
Evidence score: 2.302476
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.01763 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.95151 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
GCAGAGATTGTCAAGAGGCTGAATGCTATCTGTGCACAAGTCATTCCTTTCCTGTCCCAAGAGCACCAGCAACAAGTGGTGCAGGCTGTGGAACGGGCCAAGCAGGTGACCATGGCAGAACTGAACGCCATCATTGGG
Exons
- exon1:79612656~79612718
- exon2:79627374~79627448
IRES sequence
- 79627429~79627434
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 112
- Stop: 111
- Length: 414
- Translation cycles: 3
ATGGCAGAACTGAACGCCATCATTGGGGCAGAGATTGTCAAGAGGCTGAATGCTATCTGTGCACAAGTCATTCCTTTCCTGTCCCAAGAGCACCAGCAACAAGTGGTGCAGGCTGTGGAACGGGCCAAGCAGGTGACCATGGCAGAACTGAACGCCATCATTGGGGCAGAGATTGTCAAGAGGCTGAATGCTATCTGTGCACAAGTCATTCCTTTCCTGTCCCAAGAGCACCAGCAACAAGTGGTGCAGGCTGTGGAACGGGCCAAGCAGGTGACCATGGCAGAACTGAACGCCATCATTGGGGCAGAGATTGTCAAGAGGCTGAATGCTATCTGTGCACAAGTCATTCCTTTCCTGTCCCAAGAGCACCAGCAACAAGTGGTGCAGGCTGTGGAACGGGCCAAGCAGGTGACC
- Start: 30
- Stop: 29
- Length: 414
- Translation cycles: 3
CTGTGCACAAGTCATTCCTTTCCTGTCCCAAGAGCACCAGCAACAAGTGGTGCAGGCTGTGGAACGGGCCAAGCAGGTGACCATGGCAGAACTGAACGCCATCATTGGGGCAGAGATTGTCAAGAGGCTGAATGCTATCTGTGCACAAGTCATTCCTTTCCTGTCCCAAGAGCACCAGCAACAAGTGGTGCAGGCTGTGGAACGGGCCAAGCAGGTGACCATGGCAGAACTGAACGCCATCATTGGGGCAGAGATTGTCAAGAGGCTGAATGCTATCTGTGCACAAGTCATTCCTTTCCTGTCCCAAGAGCACCAGCAACAAGTGGTGCAGGCTGTGGAACGGGCCAAGCAGGTGACCATGGCAGAACTGAACGCCATCATTGGGGCAGAGATTGTCAAGAGGCTGAATGCTAT