CircID: TC-hsa-TMEM209_0025
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr7:130192622~130202091
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 1.819042
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.26255 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.55649 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
TTGTACAGACTACGCCTCCACATGATCTGGCAGCAACCCAAATCCCTCCCGCTCCACCTTCCCCTTCAATTCAGGGTCAGAGTGTGTTGAGTTATAGCCCTTCTCGTTCGCCCAGTACCAGTCCCAAGTTCACCACCAGCTGTATGACTGGTTACAGCCCTCAGCTGCAAGGTCTGTCCTCAGGTGGCAGTGGTTCTTATAGCCCTGGAGTGACCTACTCGCCCGTCAGTGGTTATAATAAGTTGGCGAGCTTTAGCCCCTCTCCTCCTTCTCCGTACCCTACCACTGTTGGACCAGTGGAGAGCAGTGGATTGAGATCTCGCTACCGTTCTTCACCTACCGTCTACAACTCACCTACTGACAAAGAAGACTACATGACCGACCTACGAACTTTGGATACTTTTCTCAGAAGTGAAGAGGAGAAACAGCATAGGGTTAAGCTGG
Exons
- exon1:130202091~130201850
- exon2:130192823~130192622
IRES sequence
- 130202052~130202047
- 130202024~130202019
- 130201859~130192823
- 130192702~130192696
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 144
- Stop: 143
- Length: 1332
- Translation cycles: 3
ATGACTGGTTACAGCCCTCAGCTGCAAGGTCTGTCCTCAGGTGGCAGTGGTTCTTATAGCCCTGGAGTGACCTACTCGCCCGTCAGTGGTTATAATAAGTTGGCGAGCTTTAGCCCCTCTCCTCCTTCTCCGTACCCTACCACTGTTGGACCAGTGGAGAGCAGTGGATTGAGATCTCGCTACCGTTCTTCACCTACCGTCTACAACTCACCTACTGACAAAGAAGACTACATGACCGACCTACGAACTTTGGATACTTTTCTCAGAAGTGAAGAGGAGAAACAGCATAGGGTTAAGCTGGTTGTACAGACTACGCCTCCACATGATCTGGCAGCAACCCAAATCCCTCCCGCTCCACCTTCCCCTTCAATTCAGGGTCAGAGTGTGTTGAGTTATAGCCCTTCTCGTTCGCCCAGTACCAGTCCCAAGTTCACCACCAGCTGTATGACTGGTTACAGCCCTCAGCTGCAAGGTCTGTCCTCAGGTGGCAGTGGTTCTTATAGCCCTGGAGTGACCTACTCGCCCGTCAGTGGTTATAATAAGTTGGCGAGCTTTAGCCCCTCTCCTCCTTCTCCGTACCCTACCACTGTTGGACCAGTGGAGAGCAGTGGATTGAGATCTCGCTACCGTTCTTCACCTACCGTCTACAACTCACCTACTGACAAAGAAGACTACATGACCGACCTACGAACTTTGGATACTTTTCTCAGAAGTGAAGAGGAGAAACAGCATAGGGTTAAGCTGGTTGTACAGACTACGCCTCCACATGATCTGGCAGCAACCCAAATCCCTCCCGCTCCACCTTCCCCTTCAATTCAGGGTCAGAGTGTGTTGAGTTATAGCCCTTCTCGTTCGCCCAGTACCAGTCCCAAGTTCACCACCAGCTGTATGACTGGTTACAGCCCTCAGCTGCAAGGTCTGTCCTCAGGTGGCAGTGGTTCTTATAGCCCTGGAGTGACCTACTCGCCCGTCAGTGGTTATAATAAGTTGGCGAGCTTTAGCCCCTCTCCTCCTTCTCCGTACCCTACCACTGTTGGACCAGTGGAGAGCAGTGGATTGAGATCTCGCTACCGTTCTTCACCTACCGTCTACAACTCACCTACTGACAAAGAAGACTACATGACCGACCTACGAACTTTGGATACTTTTCTCAGAAGTGAAGAGGAGAAACAGCATAGGGTTAAGCTGGTTGTACAGACTACGCCTCCACATGATCTGGCAGCAACCCAAATCCCTCCCGCTCCACCTTCCCCTTCAATTCAGGGTCAGAGTGTGTTGAGTTATAGCCCTTCTCGTTCGCCCAGTACCAGTCCCAAGTTCACCACCAGCTGT
MTGYSPQLQGLSSGGSGSYSPGVTYSPVSGYNKLASFSPSPPSPYPTTVGPVESSGLRSRYRSSPTVYNSPTDKEDYMTDLRTLDTFLRSEEEKQHRVKLVVQTTPPHDLAATQIPPAPPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGSYSPGVTYSPVSGYNKLASFSPSPPSPYPTTVGPVESSGLRSRYRSSPTVYNSPTDKEDYMTDLRTLDTFLRSEEEKQHRVKLVVQTTPPHDLAATQIPPAPPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGSYSPGVTYSPVSGYNKLASFSPSPPSPYPTTVGPVESSGLRSRYRSSPTVYNSPTDKEDYMTDLRTLDTFLRSEEEKQHRVKLVVQTTPPHDLAATQIPPAPPSPSIQGQSVLSYSPSRSPSTSPKFTTSC