TransCirc

CircID: TC-hsa-TRMT10B_0001

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr9:37757110~37763865

Gene:

TRMT10B

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-RP11-613M10_0110

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 2.845083 MS Q-Value:
ORF	1.0
IRES sequence	0.01927
Translation initiation site	1.0
SeqComp	0.82582
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

TCTGGTGGAAAGGACAGAGGACTAAGTCCATGGACTGGAAATTGGAAGGGAGTACTCAGAAAGTAGAGTCACCTGTGCTGCAGGGGCAAGAAGGCATCCTAGAGGAGACAGGTGAAGATGGACTTCCTGAAGGCTTCCAGCTTCTGCAGATCGATGCGGAAGGCGAGTGCCAGGAGGGAGAGATCCTGGCCACAGGCAGTACGGCATGGTGCTCG

Exons

exon1:37761903~37762117

IRES sequence

37761990~37761995

Translation initiation site

37761932~37761934

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 118
Stop: 25
Length: 123
Translation cycles: 1

ATGGACTTCCTGAAGGCTTCCAGCTTCTGCAGATCGATGCGGAAGGCGAGTGCCAGGAGGGAGAGATCCTGGCCACAGGCAGTACGGCATGGTGCTCGTCTGGTGGAAAGGACAGAGGACTAA

MDFLKASSFCRSMRKASARRERSWPQAVRHGARLVERTED*

Start: 206
Stop: 66
Length: 291
Translation cycles: 2

ATGGTGCTCGTCTGGTGGAAAGGACAGAGGACTAAGTCCATGGACTGGAAATTGGAAGGGAGTACTCAGAAAGTAGAGTCACCTGTGCTGCAGGGGCAAGAAGGCATCCTAGAGGAGACAGGTGAAGATGGACTTCCTGAAGGCTTCCAGCTTCTGCAGATCGATGCGGAAGGCGAGTGCCAGGAGGGAGAGATCCTGGCCACAGGCAGTACGGCATGGTGCTCGTCTGGTGGAAAGGACAGAGGACTAAGTCCATGGACTGGAAATTGGAAGGGAGTACTCAGAAAGTAG

MVLVWWKGQRTKSMDWKLEGSTQKVESPVLQGQEGILEETGEDGLPEGFQLLQIDAEGECQEGEILATGSTAWCSSGGKDRGLSPWTGNWKGVLRK*

Start: 30
Stop: 66
Length: 252
Translation cycles: 1

ATGGACTGGAAATTGGAAGGGAGTACTCAGAAAGTAGAGTCACCTGTGCTGCAGGGGCAAGAAGGCATCCTAGAGGAGACAGGTGAAGATGGACTTCCTGAAGGCTTCCAGCTTCTGCAGATCGATGCGGAAGGCGAGTGCCAGGAGGGAGAGATCCTGGCCACAGGCAGTACGGCATGGTGCTCGTCTGGTGGAAAGGACAGAGGACTAAGTCCATGGACTGGAAATTGGAAGGGAGTACTCAGAAAGTAG

MDWKLEGSTQKVESPVLQGQEGILEETGEDGLPEGFQLLQIDAEGECQEGEILATGSTAWCSSGGKDRGLSPWTGNWKGVLRK*