CircID: TC-hsa-UBA6_0064
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr4:67665189~67668674
Xref:
circAtlas: hsa-UBA6_0041
circBase: hsa_circ_0069899
deepbase2: hsa-circRNA14020-5
circpedia2: HSA_CIRCpedia_137439
circBase: hsa_circ_0069899
deepbase2: hsa-circRNA14020-5
circpedia2: HSA_CIRCpedia_137439
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 1.918886
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.30736 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.61152 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
GCAAATCCTGGCATTGTTACTTGCCTTGAAAATCATCCTCACAAACTGGAGACAGGACAATTCCTAACATTTCGAGAAATTAATGGAATGACAGGTTTAAATGGATCTATACAACAAATAACGGTGATATCGCCATTTTCTTTTAGTATTGGTGACACCACAGAACTGGAACCATATTTACATGGAGGCATAGCTGTCCAAGTTAAGACTCCTAAAACAGTTTTTTTT
Exons
- exon1:67668674~67668551
- exon2:67665292~67665189
IRES sequence
- 67668672~67668667
- 67668609~67668604
- 67668598~67668591
- 67668579~67668574
- 67668567~67668561
- 67668559~67668554
- 67665213~67665208
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 88
- Stop: 87
- Length: 684
- Translation cycles: 3
ATGACAGGTTTAAATGGATCTATACAACAAATAACGGTGATATCGCCATTTTCTTTTAGTATTGGTGACACCACAGAACTGGAACCATATTTACATGGAGGCATAGCTGTCCAAGTTAAGACTCCTAAAACAGTTTTTTTTGCAAATCCTGGCATTGTTACTTGCCTTGAAAATCATCCTCACAAACTGGAGACAGGACAATTCCTAACATTTCGAGAAATTAATGGAATGACAGGTTTAAATGGATCTATACAACAAATAACGGTGATATCGCCATTTTCTTTTAGTATTGGTGACACCACAGAACTGGAACCATATTTACATGGAGGCATAGCTGTCCAAGTTAAGACTCCTAAAACAGTTTTTTTTGCAAATCCTGGCATTGTTACTTGCCTTGAAAATCATCCTCACAAACTGGAGACAGGACAATTCCTAACATTTCGAGAAATTAATGGAATGACAGGTTTAAATGGATCTATACAACAAATAACGGTGATATCGCCATTTTCTTTTAGTATTGGTGACACCACAGAACTGGAACCATATTTACATGGAGGCATAGCTGTCCAAGTTAAGACTCCTAAAACAGTTTTTTTTGCAAATCCTGGCATTGTTACTTGCCTTGAAAATCATCCTCACAAACTGGAGACAGGACAATTCCTAACATTTCGAGAAATTAATGGA