CircID: TC-hsa-UBE2J2_0008
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr1:1256992~1257310
Xref:
circAtlas: hsa-UBE2J2_0005
circBase: hsa_circ_0008063
circRNADb: hsa_circ_15792
deepbase2: hsa-circRNA8243-13
circpedia2: HSA_CIRCpedia_27522
circBase: hsa_circ_0008063
circRNADb: hsa_circ_15792
deepbase2: hsa-circRNA8243-13
circpedia2: HSA_CIRCpedia_27522
Evidences
| Ribosome/polysome profiling | 0.33333 |
Evidence score: 2.01437
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.03062 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.65042 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
GTGGCTATTATCATGGAAAACTAATTTTTCCCAGAGAATTTCCTTTCAAACCTCCCAGTATCTATATGATCACTCCCAACGGGAGGTTTAAGTGCAACACCAGGCTGTGTCTTTCTATCACGGATTTCCACCCGGACACGTGGAACCCGGCCTGGTCTGTCTCCACCATCCTGACTGGGCTCCTGAGCTTCATGGTGGAGAAGGGCCCCACCCTGGGCAGTATAGAGACGTCGGACTTCACG
Exons
- exon1:1257310~1257208
- exon2:1257130~1256992
IRES sequence
- 1257248~1257243
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 152
- Stop: 24
- Length: 357
- Translation cycles: 2
CTGGTCTGTCTCCACCATCCTGACTGGGCTCCTGAGCTTCATGGTGGAGAAGGGCCCCACCCTGGGCAGTATAGAGACGTCGGACTTCACGGTGGCTATTATCATGGAAAACTAATTTTTCCCAGAGAATTTCCTTTCAAACCTCCCAGTATCTATATGATCACTCCCAACGGGAGGTTTAAGTGCAACACCAGGCTGTGTCTTTCTATCACGGATTTCCACCCGGACACGTGGAACCCGGCCTGGTCTGTCTCCACCATCCTGACTGGGCTCCTGAGCTTCATGGTGGAGAAGGGCCCCACCCTGGGCAGTATAGAGACGTCGGACTTCACGGTGGCTATTATCATGGAAAACTAA
- Start: 66
- Stop: 24
- Length: 201
- Translation cycles: 1