CircID: TC-hsa-UBE2J2_0010
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr1:1256992~1267992
Xref:
circAtlas: hsa-UBE2J2_0006
circBase: hsa_circ_0009250
circRNADb: hsa_circ_30752
deepbase2: hsa-circRNA8243-14
circpedia2: HSA_CIRCpedia_27525
circBase: hsa_circ_0009250
circRNADb: hsa_circ_30752
deepbase2: hsa-circRNA8243-14
circpedia2: HSA_CIRCpedia_27525
Evidences
| Ribosome/polysome profiling | 0.33333 |
Evidence score: 2.36078
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.22959 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.79785 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
ATGAGCAGCACCAGCAGTAAGAGGGCTCCGACCACGGCAACCCAGAGGCTGAAGCAGGACTACCTTCGCATTAAGAAAGACCCGGTGCCTTACATCTGTGCCGAGCCCCTCCCTTCGAATATTCTCGAGTGAGAAAAGATATTTCAGTGAGTTGAAAGGAAATGTGTTTCGGCTTGGTCAGGGGTCCACCTTCTCTGGCTCACAGAGGAGGCCCAGCCCAGGCAGGCGGAGGATACCCAGGGTGAGGCGGAGCCCCTTGGCCACCAGAGTGCTCTCTGCCCCCAGTGTTGAAAATCACATGTGGCCCCAGGACATCGCTGGCAGGCACTATGTCGTCCGAGGCCCAGAGATGACCCCTTATGAAGGTGGCTATTATCATGGAAAACTAATTTTTCCCAGAGAATTTCCTTTCAAACCTCCCAGTATCTATATGATCACTCCCAACGGGAGGTTTAAGTGCAACACCAGGCTGTGTCTTTCTATCACGGATTTCCACCCGGACACGTGGAACCCGGCCTGGTCTGTCTCCACCATCCTGACTGGGCTCCTGAGCTTCATGGTGGAGAAGGGCCCCACCCTGGGCAGTATAGAGACGTCGGACTTCACG
Exons
- exon1:1267992~1267862
- exon2:1266290~1266098
- exon3:1263386~1263346
- exon4:1257310~1257208
- exon5:1257130~1256992
IRES sequence
- 1267921~1267912
- 1267875~1267870
- 1266288~1266280
- 1257248~1257243
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 517
- Stop: 20
- Length: 111
- Translation cycles: 1
- Start: 299
- Stop: 132
- Length: 441
- Translation cycles: 1
ATGTGGCCCCAGGACATCGCTGGCAGGCACTATGTCGTCCGAGGCCCAGAGATGACCCCTTATGAAGGTGGCTATTATCATGGAAAACTAATTTTTCCCAGAGAATTTCCTTTCAAACCTCCCAGTATCTATATGATCACTCCCAACGGGAGGTTTAAGTGCAACACCAGGCTGTGTCTTTCTATCACGGATTTCCACCCGGACACGTGGAACCCGGCCTGGTCTGTCTCCACCATCCTGACTGGGCTCCTGAGCTTCATGGTGGAGAAGGGCCCCACCCTGGGCAGTATAGAGACGTCGGACTTCACGATGAGCAGCACCAGCAGTAAGAGGGCTCCGACCACGGCAACCCAGAGGCTGAAGCAGGACTACCTTCGCATTAAGAAAGACCCGGTGCCTTACATCTGTGCCGAGCCCCTCCCTTCGAATATTCTCGAGTGA