CircID: TC-hsa-VPS13A_0247
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr9:77357692~77416179
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 3.092882
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.51581 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.57707 | |
| m6A sites | 1.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
GTTCGCCTAACCCCTACTGGTCATAACATGAAAATTCTGCAGCCGCATGTAATAGCTCTACGAAGAAATTATCTTCCAGCATTAAAAGTGGAATATAACACATCTGCACATCAATCATCATTTAGAATTCAGATTTACAGAATACAGATCCAAAATCAGATACATGGTGCTGTATTTCCCTTTGTGTTTTATCCTGTTAAACCTCCAAAGTCGGTCACCATGGATTCAGCACCAAAGCCCTTTACAGATGTCAGTATTGTCATGAGATCTGCAGGACATTCCCAGATATCACGTATTAAGTATTTCAAAGTATTGATTCAAGAAATGGATCTCAGGTTAGATCTTGGGTTTATCTATGCTTTAACAGACCTTATGACAGAAGCTGAGGTGACTGAAAATACAGAGGTTGAGCTTTTTCATAAAGATATAGAAGCTTTCAAAGAAGAATATAAAACAGCCTCATTAGTAGATCAATCACAAGTCAGCCTCTATGAATATTTTCATATATCTCCTATCAAGTTACATTTAAGTGTTTCACTGAGTTCCGGCAGAGAAGAAGCTAAAGATTCAAAACAAAATGGAGGACTGATTCCAGTTCATTCTTTAAATCTTTTGCTGAAGAGTATTGGTGCCACACTGACAGATGTACAAGATGTAGTTTTTAAGCTTGCATTTTTTGAACTCAACTATCAGTTCCATACAACATCCGATCTACAGTCTGAAGTCATAAGACACTATTCAAAACAGGCCATTAAGCAGATGTATGTACTCATTCTTGGACTTGATGTTTTGGGAAATCCATTTGGCTTAATTAGAGAATTTTCTGAAGGTGTAGAAGCATTTTTTTATGAACCTTACCAGGGAGCCATCCAGGGTCCTGAAGAGTTTGTGGAAGGAATGGCACTAGGACTTAAGGCACTAGTTGGTGGAGCTGTTGGTGGATTGGCTGGTGCTGCCTCCAAAATCACCGGTGCTATGGCTAAGGGGGTAGCAGCTATGACCATGGATGAAGACTACCAACAGAAGAGAAGAGAAGCCATGAATAAGCAACCAGCTGGTTTTAGAGAAGGCATCACTCGTGGAGGAAAAGGCTTAGTTTCTGGATTTGTTAGTGGCATAACAGGAATTGTTACAAAACCAATCAAAGGAGCTCAAAAAGGAGGAGCAGCTGGTTTCTTTAAAGGTGTTGGGAAAGGTTTAGTAGGAGCGGTAGCAAGGCCAACTGGAGGCATCATAGACATGGCTAGCAGTACATTTCAGGGAATAAAAAGAGCTACAGAGACTTCTGAAGTGGAGAGTCTGCGACCTCCTCGGTTCTTCAATGAAGATGGAGTTATCAGACCGTACAGGTTGAGGGATGGGACTGGAAATCAAATGTTACAGGTCATGGAAAATGGAAGATTTGCAAAATACAAATATTTTACCCATGTCATGATCAATAAGACAGATATGCTAATGATAACCAGACGTGGTGTATTGTTTGTAACAAAGGGAACATTTGGACAACTCACGTGTGAGTGGCAGTATAGTTTTGATGAATTTACCAAAGAGCCATTCATTGTTCATGGGAGAAGATTGCGCATTGAAGCAAAGGAACGAGTGAAGTCTGTATTTCATGCCAGAGAGTTTGGAAAAATAATTAACTTCAAGACCCCAGAGGATGCCAGGTGGATCCTCACAAAGCTACAAGAAGCAAGAGAACCTTCTCCGAGCCTCTGACAGAGAACACTGCCTGAAGACACACAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATGCTAAAAAACAAAAACAAACAAAAAAACAAAAACAAAAAAACAAAACCAGAATCAG
Exons
- exon1:77357692~77357838
- exon2:77358357~77358438
- exon3:77359333~77359402
- exon4:77360536~77360641
- exon5:77365460~77365573
- exon6:77366727~77366872
- exon7:77368055~77368136
- exon8:77369299~77369412
- exon9:77370257~77370332
- exon10:77370415~77370578
- exon11:77370890~77370935
- exon12:77371026~77371149
- exon13:77381976~77382087
- exon14:77403236~77403321
- exon15:77405864~77405987
- exon16:77407533~77407607
- exon17:77415956~77416179
m6A sites
- 77371100
IRES sequence
- 77357722~77357728
- 77357753~77357763
- 77357783~77357789
- 77357817~77357822
- 77357832~77357837
- 77359387~77359392
- 77359397~77359402
- 77360631~77360638
- 77365473~77365484
- 77365494~77365508
- 77365515~77365520
- 77365546~77365555
- 77365556~77365564
- 77365568~77365573
- 77366731~77366736
- 77366759~77366766
- 77366778~77366785
- 77366810~77366815
- 77368087~77368092
- 77368116~77368122
- 77369346~77369351
- 77369360~77369365
- 77370499~77370509
- 77370517~77370524
- 77370920~77370925
- 77370928~77370933
- 77371031~77371036
- 77371055~77371060
- 77371141~77381976
- 77382073~77382078
- 77403259~77403274
- 77403290~77403297
- 77403298~77403303
- 77405888~77405893
- 77405932~77405937
- 77405964~77405969
- 77407571~77407582
- 77415975~77415980
- 77416035~77416041
- 77416085~77416090
- 77416126~77416169
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 1831
- Stop: 10
- Length: 72
- Translation cycles: 1