CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr4:84678168~84679237
Gene:
Gene type:
protein_coding
Strand:
-
exons:
ORFS:
Evidences
Ribosome/polysome profiling
|
0.0 |
Evidence score: 3.073766
MS Q-Value:
|
ORF
|
1.0 |
IRES sequence
|
0.10442 |
Translation initiation site
|
0.0 |
SeqComp
|
0.96935 |
m6A sites
|
1.0 |
MS evidence
|
0.0 |
circRNA sequence
GAAGCCCAAGACGAGGACAGCAGTGATTCAGAAGCAGATGAGCAGAGCATCAGCCAGGACCCTAAGGACACTCCAAGCCAACCCAGCAGCACCAGCCACAGGCCCCGGGCAGCCTCCTGCCGCGCAACAGCCGCCTGGTGTACTGACAGTGGCTCTGACGACTCCAGACGCTGGTCCGACCAGCTCAGTCTAGATGAGAAAGACGGCTTCATATTTGTGAACTATTCAGAGGGCCAGACCAGAGCCCATCTGCAGGGCCCCCTTAGCCACCCCCACCCCAATCCCATTGAGGTGCGGAATTACAGCAGATTGAAACCTGGGTACCGATGGGAACGGCAGCTGGTGTTCAGGAGTAAGCTGACTATGCACACAGCCTTTGATCGAAAGGACAATGCACACCCAGCTGAGGTCACTGCCTTGGGCATCTCCAA
Exons
- exon1:84679237~84678919
- exon2:84678279~84678168
m6A sites
- 84679179
- 84679170
- 84679157
- 84679111
IRES sequence
- 84679039~84679034
- 84678169~84679234
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 364
- Stop: 193
- Length: 261
- Translation cycles: 1
ATGCACACAGCCTTTGATCGAAAGGACAATGCACACCCAGCTGAGGTCACTGCCTTGGGCATCTCCAAGAAGCCCAAGACGAGGACAGCAGTGATTCAGAAGCAGATGAGCAGAGCATCAGCCAGGACCCTAAGGACACTCCAAGCCAACCCAGCAGCACCAGCCACAGGCCCCGGGCAGCCTCCTGCCGCGCAACAGCCGCCTGGTGTACTGACAGTGGCTCTGACGACTCCAGACGCTGGTCCGACCAGCTCAGTCTAG
MHTAFDRKDNAHPAEVTALGISKKPKTRTAVIQKQMSRASARTLRTLQANPAAPATGPGQPPAAQQPPGVLTVALTTPDAGPTSSV*
- Start: 392
- Stop: 26
- Length: 66
- Translation cycles: 1
ATGCACACCCAGCTGAGGTCACTGCCTTGGGCATCTCCAAGAAGCCCAAGACGAGGACAGCAGTGA