TransCirc

CircID: TC-hsa-WDFY3_0003

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr4:84678168~84679237

Gene:

WDFY3

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-WDFY3_0241

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 3.073766 MS Q-Value:
ORF	1.0
IRES sequence	0.10442
Translation initiation site	0.0
SeqComp	0.96935
m6A sites	1.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

GAAGCCCAAGACGAGGACAGCAGTGATTCAGAAGCAGATGAGCAGAGCATCAGCCAGGACCCTAAGGACACTCCAAGCCAACCCAGCAGCACCAGCCACAGGCCCCGGGCAGCCTCCTGCCGCGCAACAGCCGCCTGGTGTACTGACAGTGGCTCTGACGACTCCAGACGCTGGTCCGACCAGCTCAGTCTAGATGAGAAAGACGGCTTCATATTTGTGAACTATTCAGAGGGCCAGACCAGAGCCCATCTGCAGGGCCCCCTTAGCCACCCCCACCCCAATCCCATTGAGGTGCGGAATTACAGCAGATTGAAACCTGGGTACCGATGGGAACGGCAGCTGGTGTTCAGGAGTAAGCTGACTATGCACACAGCCTTTGATCGAAAGGACAATGCACACCCAGCTGAGGTCACTGCCTTGGGCATCTCCAA

Exons

exon1:84679237~84678919
exon2:84678279~84678168

m6A sites

84679179
84679170
84679157
84679111

IRES sequence

84679039~84679034
84678169~84679234

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 364
Stop: 193
Length: 261
Translation cycles: 1

ATGCACACAGCCTTTGATCGAAAGGACAATGCACACCCAGCTGAGGTCACTGCCTTGGGCATCTCCAAGAAGCCCAAGACGAGGACAGCAGTGATTCAGAAGCAGATGAGCAGAGCATCAGCCAGGACCCTAAGGACACTCCAAGCCAACCCAGCAGCACCAGCCACAGGCCCCGGGCAGCCTCCTGCCGCGCAACAGCCGCCTGGTGTACTGACAGTGGCTCTGACGACTCCAGACGCTGGTCCGACCAGCTCAGTCTAG

MHTAFDRKDNAHPAEVTALGISKKPKTRTAVIQKQMSRASARTLRTLQANPAAPATGPGQPPAAQQPPGVLTVALTTPDAGPTSSV*

Start: 392
Stop: 26
Length: 66
Translation cycles: 1

ATGCACACCCAGCTGAGGTCACTGCCTTGGGCATCTCCAAGAAGCCCAAGACGAGGACAGCAGTGA

MHTQLRSLPWASPRSPRRGQQ*