CircID: TC-hsa-WDFY3_0003

CircRNA information
Taxonomy:
Genome Version:
hg38 
Location:
chr4:84678168~84679237 
Gene:
Gene type:
protein_coding
Strand:
-
exons:
ORFS:
Evidences
Ribosome/polysome profiling 0.0
Evidence score: 3.073766
MS Q-Value:
ORF 1.0
IRES sequence 0.10442
Translation initiation site 0.0
SeqComp 0.96935
m6A sites 1.0
MS evidence 0.0
Other evidences Upload
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Structure
IRES
m6A
TIS
circRNA sequence
GAAGCCCAAGACGAGGACAGCAGTGATTCAGAAGCAGATGAGCAGAGCATCAGCCAGGACCCTAAGGACACTCCAAGCCAACCCAGCAGCACCAGCCACAGGCCCCGGGCAGCCTCCTGCCGCGCAACAGCCGCCTGGTGTACTGACAGTGGCTCTGACGACTCCAGACGCTGGTCCGACCAGCTCAGTCTAGATGAGAAAGACGGCTTCATATTTGTGAACTATTCAGAGGGCCAGACCAGAGCCCATCTGCAGGGCCCCCTTAGCCACCCCCACCCCAATCCCATTGAGGTGCGGAATTACAGCAGATTGAAACCTGGGTACCGATGGGAACGGCAGCTGGTGTTCAGGAGTAAGCTGACTATGCACACAGCCTTTGATCGAAAGGACAATGCACACCCAGCTGAGGTCACTGCCTTGGGCATCTCCAA
Exons
  • exon1:84679237~84678919
  • exon2:84678279~84678168
m6A sites
  • 84679179
  • 84679170
  • 84679157
  • 84679111
IRES sequence
  • 84679039~84679034
  • 84678169~84679234
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
  • Start: 364
  • Stop: 193
  • Length: 261
  • Translation cycles: 1
ATGCACACAGCCTTTGATCGAAAGGACAATGCACACCCAGCTGAGGTCACTGCCTTGGGCATCTCCAAGAAGCCCAAGACGAGGACAGCAGTGATTCAGAAGCAGATGAGCAGAGCATCAGCCAGGACCCTAAGGACACTCCAAGCCAACCCAGCAGCACCAGCCACAGGCCCCGGGCAGCCTCCTGCCGCGCAACAGCCGCCTGGTGTACTGACAGTGGCTCTGACGACTCCAGACGCTGGTCCGACCAGCTCAGTCTAG
MHTAFDRKDNAHPAEVTALGISKKPKTRTAVIQKQMSRASARTLRTLQANPAAPATGPGQPPAAQQPPGVLTVALTTPDAGPTSSV*
  • Start: 392
  • Stop: 26
  • Length: 66
  • Translation cycles: 1
ATGCACACCCAGCTGAGGTCACTGCCTTGGGCATCTCCAAGAAGCCCAAGACGAGGACAGCAGTGA
MHTQLRSLPWASPRSPRRGQQ*