Variant "KLF1:c.862A>T(p.Lys288*)"
Search results: 3 records
Variant information
Gene:
Variant:
KLF1:c.862A>T(p.Lys288*) 
Genomic location:
chr19:12996182(hg19) 
HGVS:
SO Term RefSeq
protein_coding NM_006563.3:c.862A>T(p.Lys288*)
protein_coding NM_006563.3:c.862A>T
protein_coding NM_001375.2:c.-3993A>T
dbSNP ID:
GWAS trait:
no data 
Modifier statisitcs
Record:
Disorder:
Reference:
Effect type:
Expressivity(3)  
Modifier effect:
Altered HbF level(1) ,Altered HbF levele(1) ,Altered gene activity(1)  
Details:
  • Target disease:
    Beta Thalassemia (DOID_12241)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered HbF level 
    Evidence:
    From review article 
    Effect:
    K288X mutation in KLF1 that disrupted the DNA-binding domain of KLF1, a key erythroid gene regulator.
    Reference:
    Title:
    Genetic Basis and Genetic Modifiers of β-Thalassemia and Sickle Cell Disease.
    Species studied:
    Human
    Abstract:
    β-thalassemia and sickle cell disease (SCD) are prototypical Mendelian single gene disorders, both caused by mutations affecting the adult β-globin gene. Despite the apparent genetic simplicity, both disorders display a remarkable spectrum of phenotypic severity and share two major genetic modifiers-α-globin genotype and innate ability to produce fetal hemoglobin (HbF, α2γ2).This article provides an overview of the genetic basis for SCD and β-thalassemia, and genetic modifiers identified through phenotype correlation studies. Identification of the genetic variants modifying HbF production in combination with α-globin genotype provide some prediction of disease severity for β-thalassemia and SCD but generation of a personalized genetic risk score to inform prognosis and guide management requires a larger panel of genetic modifiers yet to be discovered.Nonetheless, genetic studies have been successful in characterizing some of the key variants and pathways involved in HbF regulation, providing new therapeutic targets for HbF reactivation.
  • Target disease:
    Beta Thalassemia (DOID_12241)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered gene activity 
    Evidence:
    Gene activity study 
    Effect:
    KLF1 p.K288X carriers had reduced BCL11A expression
    Reference:
    Title:
    Genetic association studies in β-hemoglobinopathies.
    Species studied:
    Human
    Abstract:
    Characterization of the molecular basis of the β-thalassemias and sickle cell disease (SCD) clearly showed that individuals with the same β-globin genotypes can have extremely diverse clinical severity. Two key modifiers, an innate ability to produce fetal hemoglobin and coinheritance of α-thalassemia, both derived from family and population studies, affect the pathophysiology of both disorders at the primary level. In the past 2 decades, scientific research had applied genetic approaches to identify additional genetic modifiers. The review summarizes recent genetic studies and key genetic modifiers identified and traces the story of fetal hemoglobin genetics, which has led to an emerging network of globin gene regulation. The discoveries have provided insights on new targets for therapeutic intervention and raise possibilities of developing fetal hemoglobin predictive diagnostics for predicting disease severity in the newborn and for integration into prenatal diagnosis to better inform genetic counseling.
  • Target disease:
    Sickle Cell Anemia (DOID_10923)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered HbF levele 
    Evidence:
    From review article 
    Effect:
    K288X mutation in KLF1 that disrupted the DNA-binding domain of KLF1, a key erythroid gene regulator.
    Reference:
    Title:
    Genetic Basis and Genetic Modifiers of β-Thalassemia and Sickle Cell Disease.
    Species studied:
    Human
    Abstract:
    β-thalassemia and sickle cell disease (SCD) are prototypical Mendelian single gene disorders, both caused by mutations affecting the adult β-globin gene. Despite the apparent genetic simplicity, both disorders display a remarkable spectrum of phenotypic severity and share two major genetic modifiers-α-globin genotype and innate ability to produce fetal hemoglobin (HbF, α2γ2).This article provides an overview of the genetic basis for SCD and β-thalassemia, and genetic modifiers identified through phenotype correlation studies. Identification of the genetic variants modifying HbF production in combination with α-globin genotype provide some prediction of disease severity for β-thalassemia and SCD but generation of a personalized genetic risk score to inform prognosis and guide management requires a larger panel of genetic modifiers yet to be discovered.Nonetheless, genetic studies have been successful in characterizing some of the key variants and pathways involved in HbF regulation, providing new therapeutic targets for HbF reactivation.