Gene "KLF1"
Found 10 records
Gene information
Gene symbol:
KLF1
See related:
Ensembl: ENSG00000105610, Gene ID: 10661
Additive variants :
Undetected
Genetic interaction partners
No data
Modifier statisitcs
Record:
10 
Disorder:
Vriant:
Reference:
Effect type:
Expressivity(10)  
Modifier effect:
Altered severity(7) ,Altered HbF level(1) ,Altered HbF levele(1) ,Altered gene activity(1)  
Details:
  • Variant 1:
    Gene:
    Genomic location:
    dbSNP ID:
    Target disease:
    Beta Thalassemia(DOID_12241)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered severity 
    Evidence:
    HR=0.213, 95% CI: 0.119-0.379, P<0.001 
    Effect:
    Ameliorates the clinical severity of β-thalassemia
    Reference:
    Title:
    KLF1 mutations are relatively more common in a thalassemia endemic region and ameliorate the severity of β-thalassemia.
    Species studied:
    Human
    Abstract:
    Mutations in human Krüppel-like factor 1 (KLF1) have recently been reported to be responsible for increased fetal hemoglobin (HbF) and hemoglobin A2 (HbA2). Because increased HbF and HbA2 levels are important features of β-thalassemia, we examined whether there is any relationship between KLF1 mutation and β-thalassemia in China. To do this, we first studied the incidence of KLF1 mutations in 2 Chinese populations: 3839 individuals from a thalassemia endemic region in south China and 1190 individuals from a non-thalassemia endemic region in north China. Interestingly, we found that the prevalence of KLF1 mutations is significantly higher in the thalassemia endemic region than that in non-thalassemia endemic region (1.25% vs 0.08%). Furthermore, we identified 7 functional variants including 4 previously reported (p.Gly176AlafsX179, p.Ala298Pro, p.Thr334Arg, and c.913+1G>A) and 3 novel variants (p.His299Asp, p.Cys341Tyr, and p.Glu5Lys) in southern China. The 2 most common mutations, p.Gly176AlafsX179 and p.His299Asp, accounted for 90.6% of the total. We found that zinc-finger mutations in KLF1 were selectively represented in 12 β-thalassemia intermedia patients and resulted in significantly different transfusion-free survival curves. Our findings suggest that KLF1 mutations occur selectively in the presence of β-thalassemia to increase the production of HbF, which in turn ameliorates the clinical severity of β-thalassemia.
  • Variant 2:
    Gene:
    Genomic location:
    dbSNP ID:
    Target disease:
    Beta Thalassemia(DOID_12241)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered severity 
    Evidence:
    HR=0.213, 95% CI: 0.119-0.379, P<0.001 
    Effect:
    Ameliorates the clinical severity of β-thalassemia
    Reference:
    Title:
    KLF1 mutations are relatively more common in a thalassemia endemic region and ameliorate the severity of β-thalassemia.
    Species studied:
    Human
    Abstract:
    Mutations in human Krüppel-like factor 1 (KLF1) have recently been reported to be responsible for increased fetal hemoglobin (HbF) and hemoglobin A2 (HbA2). Because increased HbF and HbA2 levels are important features of β-thalassemia, we examined whether there is any relationship between KLF1 mutation and β-thalassemia in China. To do this, we first studied the incidence of KLF1 mutations in 2 Chinese populations: 3839 individuals from a thalassemia endemic region in south China and 1190 individuals from a non-thalassemia endemic region in north China. Interestingly, we found that the prevalence of KLF1 mutations is significantly higher in the thalassemia endemic region than that in non-thalassemia endemic region (1.25% vs 0.08%). Furthermore, we identified 7 functional variants including 4 previously reported (p.Gly176AlafsX179, p.Ala298Pro, p.Thr334Arg, and c.913+1G>A) and 3 novel variants (p.His299Asp, p.Cys341Tyr, and p.Glu5Lys) in southern China. The 2 most common mutations, p.Gly176AlafsX179 and p.His299Asp, accounted for 90.6% of the total. We found that zinc-finger mutations in KLF1 were selectively represented in 12 β-thalassemia intermedia patients and resulted in significantly different transfusion-free survival curves. Our findings suggest that KLF1 mutations occur selectively in the presence of β-thalassemia to increase the production of HbF, which in turn ameliorates the clinical severity of β-thalassemia.
  • Variant 3:
    Gene:
    Genomic location:
    dbSNP ID:
    Target disease:
    Beta Thalassemia(DOID_12241)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered severity 
    Evidence:
    HR=0.213, 95% CI: 0.119-0.379, P<0.001 
    Effect:
    Ameliorates the clinical severity of β-thalassemia
    Reference:
    Title:
    KLF1 mutations are relatively more common in a thalassemia endemic region and ameliorate the severity of β-thalassemia.
    Species studied:
    Human
    Abstract:
    Mutations in human Krüppel-like factor 1 (KLF1) have recently been reported to be responsible for increased fetal hemoglobin (HbF) and hemoglobin A2 (HbA2). Because increased HbF and HbA2 levels are important features of β-thalassemia, we examined whether there is any relationship between KLF1 mutation and β-thalassemia in China. To do this, we first studied the incidence of KLF1 mutations in 2 Chinese populations: 3839 individuals from a thalassemia endemic region in south China and 1190 individuals from a non-thalassemia endemic region in north China. Interestingly, we found that the prevalence of KLF1 mutations is significantly higher in the thalassemia endemic region than that in non-thalassemia endemic region (1.25% vs 0.08%). Furthermore, we identified 7 functional variants including 4 previously reported (p.Gly176AlafsX179, p.Ala298Pro, p.Thr334Arg, and c.913+1G>A) and 3 novel variants (p.His299Asp, p.Cys341Tyr, and p.Glu5Lys) in southern China. The 2 most common mutations, p.Gly176AlafsX179 and p.His299Asp, accounted for 90.6% of the total. We found that zinc-finger mutations in KLF1 were selectively represented in 12 β-thalassemia intermedia patients and resulted in significantly different transfusion-free survival curves. Our findings suggest that KLF1 mutations occur selectively in the presence of β-thalassemia to increase the production of HbF, which in turn ameliorates the clinical severity of β-thalassemia.
  • Variant 4:
    Gene:
    Genomic location:
    dbSNP ID:
    Target disease:
    Beta Thalassemia(DOID_12241)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered severity 
    Evidence:
    HR=0.213, 95% CI: 0.119-0.379, P<0.001 
    Effect:
    Ameliorates the clinical severity of β-thalassemia
    Reference:
    Title:
    KLF1 mutations are relatively more common in a thalassemia endemic region and ameliorate the severity of β-thalassemia.
    Species studied:
    Human
    Abstract:
    Mutations in human Krüppel-like factor 1 (KLF1) have recently been reported to be responsible for increased fetal hemoglobin (HbF) and hemoglobin A2 (HbA2). Because increased HbF and HbA2 levels are important features of β-thalassemia, we examined whether there is any relationship between KLF1 mutation and β-thalassemia in China. To do this, we first studied the incidence of KLF1 mutations in 2 Chinese populations: 3839 individuals from a thalassemia endemic region in south China and 1190 individuals from a non-thalassemia endemic region in north China. Interestingly, we found that the prevalence of KLF1 mutations is significantly higher in the thalassemia endemic region than that in non-thalassemia endemic region (1.25% vs 0.08%). Furthermore, we identified 7 functional variants including 4 previously reported (p.Gly176AlafsX179, p.Ala298Pro, p.Thr334Arg, and c.913+1G>A) and 3 novel variants (p.His299Asp, p.Cys341Tyr, and p.Glu5Lys) in southern China. The 2 most common mutations, p.Gly176AlafsX179 and p.His299Asp, accounted for 90.6% of the total. We found that zinc-finger mutations in KLF1 were selectively represented in 12 β-thalassemia intermedia patients and resulted in significantly different transfusion-free survival curves. Our findings suggest that KLF1 mutations occur selectively in the presence of β-thalassemia to increase the production of HbF, which in turn ameliorates the clinical severity of β-thalassemia.
  • Variant 5:
    Gene:
    Genomic location:
    dbSNP ID:
    Target disease:
    Beta Thalassemia(DOID_12241)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered severity 
    Evidence:
    HR=0.213, 95% CI: 0.119-0.379, P<0.001 
    Effect:
    Ameliorates the clinical severity of β-thalassemia
    Reference:
    Title:
    KLF1 mutations are relatively more common in a thalassemia endemic region and ameliorate the severity of β-thalassemia.
    Species studied:
    Human
    Abstract:
    Mutations in human Krüppel-like factor 1 (KLF1) have recently been reported to be responsible for increased fetal hemoglobin (HbF) and hemoglobin A2 (HbA2). Because increased HbF and HbA2 levels are important features of β-thalassemia, we examined whether there is any relationship between KLF1 mutation and β-thalassemia in China. To do this, we first studied the incidence of KLF1 mutations in 2 Chinese populations: 3839 individuals from a thalassemia endemic region in south China and 1190 individuals from a non-thalassemia endemic region in north China. Interestingly, we found that the prevalence of KLF1 mutations is significantly higher in the thalassemia endemic region than that in non-thalassemia endemic region (1.25% vs 0.08%). Furthermore, we identified 7 functional variants including 4 previously reported (p.Gly176AlafsX179, p.Ala298Pro, p.Thr334Arg, and c.913+1G>A) and 3 novel variants (p.His299Asp, p.Cys341Tyr, and p.Glu5Lys) in southern China. The 2 most common mutations, p.Gly176AlafsX179 and p.His299Asp, accounted for 90.6% of the total. We found that zinc-finger mutations in KLF1 were selectively represented in 12 β-thalassemia intermedia patients and resulted in significantly different transfusion-free survival curves. Our findings suggest that KLF1 mutations occur selectively in the presence of β-thalassemia to increase the production of HbF, which in turn ameliorates the clinical severity of β-thalassemia.
  • Variant 6:
    Gene:
    Genomic location:
    dbSNP ID:
    Target disease:
    Beta Thalassemia(DOID_12241)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered severity 
    Evidence:
    HR=0.213, 95% CI: 0.119-0.379, P<0.001 
    Effect:
    Ameliorates the clinical severity of β-thalassemia
    Reference:
    Title:
    KLF1 mutations are relatively more common in a thalassemia endemic region and ameliorate the severity of β-thalassemia.
    Species studied:
    Human
    Abstract:
    Mutations in human Krüppel-like factor 1 (KLF1) have recently been reported to be responsible for increased fetal hemoglobin (HbF) and hemoglobin A2 (HbA2). Because increased HbF and HbA2 levels are important features of β-thalassemia, we examined whether there is any relationship between KLF1 mutation and β-thalassemia in China. To do this, we first studied the incidence of KLF1 mutations in 2 Chinese populations: 3839 individuals from a thalassemia endemic region in south China and 1190 individuals from a non-thalassemia endemic region in north China. Interestingly, we found that the prevalence of KLF1 mutations is significantly higher in the thalassemia endemic region than that in non-thalassemia endemic region (1.25% vs 0.08%). Furthermore, we identified 7 functional variants including 4 previously reported (p.Gly176AlafsX179, p.Ala298Pro, p.Thr334Arg, and c.913+1G>A) and 3 novel variants (p.His299Asp, p.Cys341Tyr, and p.Glu5Lys) in southern China. The 2 most common mutations, p.Gly176AlafsX179 and p.His299Asp, accounted for 90.6% of the total. We found that zinc-finger mutations in KLF1 were selectively represented in 12 β-thalassemia intermedia patients and resulted in significantly different transfusion-free survival curves. Our findings suggest that KLF1 mutations occur selectively in the presence of β-thalassemia to increase the production of HbF, which in turn ameliorates the clinical severity of β-thalassemia.
  • Variant 7:
    Gene:
    Genomic location:
    dbSNP ID:
    Target disease:
    Beta Thalassemia(DOID_12241)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered severity 
    Evidence:
    HR=0.213, 95% CI: 0.119-0.379, P<0.001 
    Effect:
    Ameliorates the clinical severity of β-thalassemia
    Reference:
    Title:
    KLF1 mutations are relatively more common in a thalassemia endemic region and ameliorate the severity of β-thalassemia.
    Species studied:
    Human
    Abstract:
    Mutations in human Krüppel-like factor 1 (KLF1) have recently been reported to be responsible for increased fetal hemoglobin (HbF) and hemoglobin A2 (HbA2). Because increased HbF and HbA2 levels are important features of β-thalassemia, we examined whether there is any relationship between KLF1 mutation and β-thalassemia in China. To do this, we first studied the incidence of KLF1 mutations in 2 Chinese populations: 3839 individuals from a thalassemia endemic region in south China and 1190 individuals from a non-thalassemia endemic region in north China. Interestingly, we found that the prevalence of KLF1 mutations is significantly higher in the thalassemia endemic region than that in non-thalassemia endemic region (1.25% vs 0.08%). Furthermore, we identified 7 functional variants including 4 previously reported (p.Gly176AlafsX179, p.Ala298Pro, p.Thr334Arg, and c.913+1G>A) and 3 novel variants (p.His299Asp, p.Cys341Tyr, and p.Glu5Lys) in southern China. The 2 most common mutations, p.Gly176AlafsX179 and p.His299Asp, accounted for 90.6% of the total. We found that zinc-finger mutations in KLF1 were selectively represented in 12 β-thalassemia intermedia patients and resulted in significantly different transfusion-free survival curves. Our findings suggest that KLF1 mutations occur selectively in the presence of β-thalassemia to increase the production of HbF, which in turn ameliorates the clinical severity of β-thalassemia.
  • Gene:
    Genomic location:
    chr19:12996182
    dbSNP ID:
    Target disease:
    Beta Thalassemia(DOID_12241)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered HbF level 
    Evidence:
    From review article 
    Effect:
    K288X mutation in KLF1 that disrupted the DNA-binding domain of KLF1, a key erythroid gene regulator.
    Reference:
    Title:
    Genetic Basis and Genetic Modifiers of β-Thalassemia and Sickle Cell Disease.
    Species studied:
    Human
    Abstract:
    β-thalassemia and sickle cell disease (SCD) are prototypical Mendelian single gene disorders, both caused by mutations affecting the adult β-globin gene. Despite the apparent genetic simplicity, both disorders display a remarkable spectrum of phenotypic severity and share two major genetic modifiers-α-globin genotype and innate ability to produce fetal hemoglobin (HbF, α2γ2).This article provides an overview of the genetic basis for SCD and β-thalassemia, and genetic modifiers identified through phenotype correlation studies. Identification of the genetic variants modifying HbF production in combination with α-globin genotype provide some prediction of disease severity for β-thalassemia and SCD but generation of a personalized genetic risk score to inform prognosis and guide management requires a larger panel of genetic modifiers yet to be discovered.Nonetheless, genetic studies have been successful in characterizing some of the key variants and pathways involved in HbF regulation, providing new therapeutic targets for HbF reactivation.
  • Gene:
    Genomic location:
    chr19:12996182
    dbSNP ID:
    Target disease:
    Beta Thalassemia(DOID_12241)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered gene activity 
    Evidence:
    Gene activity study 
    Effect:
    KLF1 p.K288X carriers had reduced BCL11A expression
    Reference:
    Title:
    Genetic association studies in β-hemoglobinopathies.
    Species studied:
    Human
    Abstract:
    Characterization of the molecular basis of the β-thalassemias and sickle cell disease (SCD) clearly showed that individuals with the same β-globin genotypes can have extremely diverse clinical severity. Two key modifiers, an innate ability to produce fetal hemoglobin and coinheritance of α-thalassemia, both derived from family and population studies, affect the pathophysiology of both disorders at the primary level. In the past 2 decades, scientific research had applied genetic approaches to identify additional genetic modifiers. The review summarizes recent genetic studies and key genetic modifiers identified and traces the story of fetal hemoglobin genetics, which has led to an emerging network of globin gene regulation. The discoveries have provided insights on new targets for therapeutic intervention and raise possibilities of developing fetal hemoglobin predictive diagnostics for predicting disease severity in the newborn and for integration into prenatal diagnosis to better inform genetic counseling.
  • Gene:
    Genomic location:
    chr19:12996182
    dbSNP ID:
    Target disease:
    Sickle Cell Anemia(DOID_10923)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered HbF levele 
    Evidence:
    From review article 
    Effect:
    K288X mutation in KLF1 that disrupted the DNA-binding domain of KLF1, a key erythroid gene regulator.
    Reference:
    Title:
    Genetic Basis and Genetic Modifiers of β-Thalassemia and Sickle Cell Disease.
    Species studied:
    Human
    Abstract:
    β-thalassemia and sickle cell disease (SCD) are prototypical Mendelian single gene disorders, both caused by mutations affecting the adult β-globin gene. Despite the apparent genetic simplicity, both disorders display a remarkable spectrum of phenotypic severity and share two major genetic modifiers-α-globin genotype and innate ability to produce fetal hemoglobin (HbF, α2γ2).This article provides an overview of the genetic basis for SCD and β-thalassemia, and genetic modifiers identified through phenotype correlation studies. Identification of the genetic variants modifying HbF production in combination with α-globin genotype provide some prediction of disease severity for β-thalassemia and SCD but generation of a personalized genetic risk score to inform prognosis and guide management requires a larger panel of genetic modifiers yet to be discovered.Nonetheless, genetic studies have been successful in characterizing some of the key variants and pathways involved in HbF regulation, providing new therapeutic targets for HbF reactivation.