Variant "MTHFR:c.A1298C(p.Glu429Ala)"
Search results: 4 records
Variant information
Gene:
Variant:
MTHFR:c.A1298C(p.Glu429Ala) 
Genomic location:
chr1:11854476(hg19) 
HGVS:
SO Term RefSeq
protein_coding NM_005957.4:c.1286A>C(p.Glu429Ala)
protein_coding NM_001010881.1:c.*4973T>G
Alias:
MTHFR:c.A1298C, MTHFR:A1298C, MTHFR:rs1801131 
dbSNP ID:
GWAS trait:
no data 
Modifier statisitcs
Record:
Disorder:
Reference:
Effect type:
Expressivity(4)  
Modifier effect:
Risk factor(2) ,Altered MTHFR activity(1) ,Altered severity(1)  
Details:
  • Target disease:
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    P value =0.001, OR=0.382, 95% CI: 0.222-0.658 
    Effect:
    C677T and A1299C Polymorphism as Risk Modifiers of Pediatric Acute Lymphoblastic Leukemia
    Alias in reference:
    MTHFR:c.A1298C
    Reference:
    Title:
    Synergistic effect of methyltetrahydrofolate reductase (MTHFR) C677T and A1298C polymorphism as risk modifiers of pediatric acute lymphoblastic leukemia.
    Species studied:
    Human
    Abstract:
    ALL is the most common pediatric cancer. The causes of the majority of pediatric acute leukemia are unknown and are likely to involve an interaction between genetic and environmental factors. Therefore, unfavourable gene-environmental interactions might be involved in the genesis of ALL. The aim of this work was to evaluate, in a case-control study, whether the common polymorphisms in 5, 10-methylenetetrahydrofolate reductase (MTHFR) namely (C677T and A1298C) and methionine synthase (MS) (A2756G) genes may play a role in altering susceptibility to pediatric ALL as individual genes and in combination.
  • Target disease:
    Cancer (DOID_162)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    From review article 
    Effect:
    Variation in the MTHFR gene (including A1298C, rs1801131) reported a 7.4-fold increased risk of attention-deficit/hyperactivity disorder
    Alias in reference:
    MTHFR:c.A1298C(p.Glu429Ala)
    Reference:
    Title:
    Evidence for Genetic Risk Contributing to Long-Term Adverse Treatment Effects in Childhood Cancer Survivors.
    Species studied:
    Human
    Abstract:
    Survivors of childhood cancer are at increased risk for therapy-related morbidities and mortality. Although the demographic and clinical factors predicting the risk for long-term effects of cancer therapy are well known, the impact of genetic risk for specific late effects is less clearly defined. Here, we review the extant literature and recent research describing genetic modifiers to risk for the more common late effects of childhood cancer therapy. Results of this research support the need for clinical trials that attempt to further refine risk prediction by incorporating genetic testing into existing algorithms that are primarily based on clinical and demographic factors. Confirmation of genetic predisposition, as defined by reproducibility and prospective validation, would permit therapeutic modification and discussion of individualized survivor care plans even at initial cancer diagnosis.
  • Target disease:
    Effect type:
    Expressivity 
    Modifier effect:
    Altered MTHFR activity 
    Evidence:
    P<0.05 
    Effect:
    The A1298C mutation clearly reduces MTHFR activity, albeit to a lesser extent than the C677T mutation.
    Alias in reference:
    MTHFR:rs1801131
    Reference:
    Title:
    A second genetic polymorphism in methylenetetrahydrofolate reductase (MTHFR) associated with decreased enzyme activity.
    Species studied:
    Human
    Abstract:
    A common mutation in methylenetetrahydrofolate reductase (MTHFR), C677T, results in a thermolabile variant with reduced activity. Homozygous mutant individuals (approximately 10% of North Americans) are predisposed to mild hyperhomocysteinemia, when their folate status is low. This genetic-nutrient interactive effect is believed to increase the risk for neural tube defects and vascular disease. In this communication, we characterize a second common variant in MTHFR (A1298C), an E to A substitution. Homozygosity was observed in approximately 10% of Canadian individuals. This polymorphism was associated with decreased enzyme activity; homozygotes had approximately 60% of control activity in lymphocytes. Heterozygotes for both the C677T and the A1298C mutation, approximately 15% of individuals, had 50-60% of control activity, a value that was lower than that seen in single heterozygotes for the C677T variant. No individuals were homozygous for both mutations. Additional studies of the A1298C mutation, in the absence and presence of the C677T mutation, are warranted, to adequately address the role of this new genetic variant in complex traits. A silent genetic variant, T1317C, was identified in the same exon. It was relatively infrequent (allele frequency 5%) in our study group, but was quite common in a small sample of African individuals (allele frequency 39%).
  • Target disease:
    Effect type:
    Expressivity 
    Modifier effect:
    Altered severity 
    Evidence:
    OR=0.244; 95% CI: 0.077-0.771 
    Effect:
    The MTHFR C677T and A1298C polymorphisms do not alter the risk of BC, but are associated with the clinical severity of BC.
    Alias in reference:
    MTHFR:A1298C
    Reference:
    Title:
    Can MTHFR C677T and A1298C Polymorphisms Alter the Risk and Severity of Sporadic Breast Cancer in Brazilian Women
    Species studied:
    Human
    Abstract:
    Polymorphisms in the methylenetetrahydrofolate reductase gene (MTHFR) modify the risk and severity of sporadic breast cancer (BC). In this context, the MTHFR C677T and A1298C polymorphisms have been associated with risk and severity of sporadic BC.