Variant "BRCA1:c.5333-36_5406+400del"
Search results: 2 records
Variant information
Gene:
Variant:
BRCA1:c.5333-36_5406+400del 
HGVS:
SO Term RefSeq
protein_coding NM_007300.3:c.5396-36_5469+400del
protein_coding NM_007298.3:c.2021-36_2094+400del
protein_coding NM_007297.3:c.5192-36_5265+400del
protein_coding NM_007294.3:c.5333-36_5406+400del
pseudogene NR_027676.1:n.5469-36_5542+400del
protein_coding 1JNX:X_1765-X_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 1N5O:X_1765-X_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 1T15:A_1765-A_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 1T29:A_1765-A_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 1T2U:A_1765-A_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 1Y98:A_1765-A_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K0H:A_1765-A_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K0K:A_1765-A_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K15:A_1765-A_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K16:A_1765-A_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXA:A_1765-A_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXB:A_1765-A_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXC:X_1765-X_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXD:A_1765-A_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:A_1765-A_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:B_1765-B_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:C_1765-C_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 4IFI:A_1765-A_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 4IGK:A_1765-A_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 4IGK:B_1765-B_1799:NM_007294.3:c.5333-36_5406+400del
protein_coding 1JNX:X_1766-X_1792:NM_007294.3:c.5333-36_5406+400del
protein_coding 1N5O:X_1766-X_1792:NM_007294.3:c.5333-36_5406+400del
protein_coding 1T15:A_1766-A_1792:NM_007294.3:c.5333-36_5406+400del
protein_coding 1T2U:A_1766-A_1792:NM_007294.3:c.5333-36_5406+400del
protein_coding 1Y98:A_1766-A_1792:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K0H:A_1766-A_1792:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K0K:A_1766-A_1792:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K16:A_1766-A_1792:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXB:A_1766-A_1792:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXC:X_1766-X_1792:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXD:A_1766-A_1792:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:A_1766-A_1792:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:B_1766-B_1792:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:C_1766-C_1792:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:D_1766-D_1792:NM_007294.3:c.5333-36_5406+400del
protein_coding 4IFI:A_1766-A_1792:NM_007294.3:c.5333-36_5406+400del
protein_coding 4IGK:A_1766-A_1792:NM_007294.3:c.5333-36_5406+400del
protein_coding 4IGK:B_1766-B_1792:NM_007294.3:c.5333-36_5406+400del
protein_coding 1JNX:X_1764-X_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 1JNX:X_1766-X_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 1N5O:X_1764-X_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 1N5O:X_1766-X_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 1T15:A_1764-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 1T15:A_1766-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 1T29:A_1764-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 1T29:A_1766-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 1T2U:A_1764-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 1T2U:A_1766-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 1Y98:A_1766-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K0H:A_1764-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K0H:A_1766-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K0K:A_1764-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K0K:A_1766-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K15:A_1764-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXA:A_1764-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXA:A_1766-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXB:A_1764-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXB:A_1766-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXC:X_1764-X_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXC:X_1766-X_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXD:A_1764-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXD:A_1766-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:A_1764-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:A_1766-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:B_1764-B_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:B_1766-B_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:C_1764-C_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:C_1766-C_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:D_1764-D_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:D_1766-D_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 4IFI:A_1766-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 4IGK:A_1766-A_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 4IGK:B_1764-B_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 4IGK:B_1766-B_1790:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K15:A_1761-A_1789:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXD:A_1761-A_1789:NM_007294.3:c.5333-36_5406+400del
protein_coding 1N5O:X_1762-X_1788:NM_007294.3:c.5333-36_5406+400del
protein_coding 1T29:A_1762-A_1788:NM_007294.3:c.5333-36_5406+400del
protein_coding 1T2U:A_1761-A_1788:NM_007294.3:c.5333-36_5406+400del
protein_coding 1Y98:A_1761-A_1788:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K0K:A_1761-A_1788:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K15:A_1761-A_1788:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K16:A_1761-A_1788:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXA:A_1761-A_1788:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXB:A_1761-A_1788:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXC:X_1761-X_1788:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:A_1761-A_1788:NM_007294.3:c.5333-36_5406+400del
protein_coding 1JNX:X_1759-X_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 1JNX:X_1761-X_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 1N5O:X_1761-X_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 1T15:A_1761-A_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 1T2U:A_1761-A_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 1Y98:A_1761-A_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K0H:A_1759-A_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K0H:A_1761-A_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K0K:A_1759-A_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K0K:A_1761-A_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K15:A_1759-A_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K15:A_1761-A_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 3K16:A_1761-A_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXA:A_1761-A_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXB:A_1761-A_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXC:X_1761-X_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXD:A_1761-A_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:A_1761-A_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:B_1761-B_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:C_1761-C_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:D_1761-D_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 4IFI:A_1761-A_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 4IGK:A_1761-A_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 4IGK:B_1761-B_1787:NM_007294.3:c.5333-36_5406+400del
protein_coding 1T2U:A_1759-A_1786:NM_007294.3:c.5333-36_5406+400del
protein_coding 3PXE:C_1759-C_1786:NM_007294.3:c.5333-36_5406+400del
protein_coding NM_007299.3:c.2021-1527_2021-1018del
show all
dbSNP ID:
GWAS trait:
no data 
Modifier statisitcs
Record:
Disorder:
Reference:
Effect type:
Expressivity(2)  
Modifier effect:
Risk factor(2)  
Details:
  • Target disease:
    Breast Cancer (DOID_1612)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    Frequently observed mutations 
    Effect:
    Knowledge of the population-specific mutational spectrum in BRCA1 and BRCA2 could inform efficient strategies for genetic testing and may justify a more broad-based oncogenetic testing in some populations.
    Reference:
    Title:
    Mutational spectrum in a worldwide study of 29,700 families with BRCA1 or BRCA2 mutations.
    Species studied:
    Human
    Abstract:
    The prevalence and spectrum of germline mutations in BRCA1 and BRCA2 have been reported in single populations, with the majority of reports focused on White in Europe and North America. The Consortium of Investigators of Modifiers of BRCA1/2 (CIMBA) has assembled data on 18,435 families with BRCA1 mutations and 11,351 families with BRCA2 mutations ascertained from 69 centers in 49 countries on six continents. This study comprehensively describes the characteristics of the 1,650 unique BRCA1 and 1,731 unique BRCA2 deleterious (disease-associated) mutations identified in the CIMBA database. We observed substantial variation in mutation type and frequency by geographical region and race/ethnicity. In addition to known founder mutations, mutations of relatively high frequency were identified in specific racial/ethnic or geographic groups that may reflect founder mutations and which could be used in targeted (panel) first pass genotyping for specific populations. Knowledge of the population-specific mutational spectrum in BRCA1 and BRCA2 could inform efficient strategies for genetic testing and may justify a more broad-based oncogenetic testing in some populations.
  • Target disease:
    Ovarian Cancer (DOID_2394)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    Frequently observed mutations 
    Effect:
    Knowledge of the population-specific mutational spectrum in BRCA1 and BRCA2 could inform efficient strategies for genetic testing and may justify a more broad-based oncogenetic testing in some populations.
    Reference:
    Title:
    Mutational spectrum in a worldwide study of 29,700 families with BRCA1 or BRCA2 mutations.
    Species studied:
    Human
    Abstract:
    The prevalence and spectrum of germline mutations in BRCA1 and BRCA2 have been reported in single populations, with the majority of reports focused on White in Europe and North America. The Consortium of Investigators of Modifiers of BRCA1/2 (CIMBA) has assembled data on 18,435 families with BRCA1 mutations and 11,351 families with BRCA2 mutations ascertained from 69 centers in 49 countries on six continents. This study comprehensively describes the characteristics of the 1,650 unique BRCA1 and 1,731 unique BRCA2 deleterious (disease-associated) mutations identified in the CIMBA database. We observed substantial variation in mutation type and frequency by geographical region and race/ethnicity. In addition to known founder mutations, mutations of relatively high frequency were identified in specific racial/ethnic or geographic groups that may reflect founder mutations and which could be used in targeted (panel) first pass genotyping for specific populations. Knowledge of the population-specific mutational spectrum in BRCA1 and BRCA2 could inform efficient strategies for genetic testing and may justify a more broad-based oncogenetic testing in some populations.