Variant "COMT:c.472G>A(p.Val158Met)"
Search results: 3 records
Variant information
Gene:
Variant:
COMT:c.472G>A(p.Val158Met) 
Genomic location:
chr22:19951271(hg19) 
HGVS:
SO Term RefSeq
protein_coding NM_000754.3:c.472G>A(p.Val158Met)
protein_coding NM_001135161.1:c.472G>A(p.Val158Met)
protein_coding NM_001135162.1:c.472G>A(p.Val158Met)
protein_coding NM_007310.2:c.322G>A(p.Val108Met)
protein_coding 4PYI:A_124-A_158:NM_000754.3:c.472G>A
protein_coding 4PYI:A_127-A_158:NM_000754.3:c.472G>A
protein_coding 4PYI:A_128-A_158:NM_000754.3:c.472G>A
protein_coding 4PYI:A_72-A_158:NM_000754.3:c.472G>A
protein_coding 4PYI:A_124-A_158:NM_001135161.1:c.472G>A
protein_coding 4PYI:A_127-A_158:NM_001135161.1:c.472G>A
protein_coding 4PYI:A_128-A_158:NM_001135161.1:c.472G>A
protein_coding 4PYI:A_72-A_158:NM_001135161.1:c.472G>A
protein_coding 4PYI:A_124-A_158:NM_001135162.1:c.472G>A
protein_coding 4PYI:A_127-A_158:NM_001135162.1:c.472G>A
protein_coding 4PYI:A_128-A_158:NM_001135162.1:c.472G>A
protein_coding 4PYI:A_72-A_158:NM_001135162.1:c.472G>A
pseudogene NR_039918.1:n.-5G>A
show all
Alias:
COMT:Val(158)Met, COMT:p.V158M 
dbSNP ID:
rs4680  
GWAS trait:
Modifier statisitcs
Record:
Disorder:
Reference:
Effect type:
Expressivity(2) ,Pleiotropy(1)  
Modifier effect:
Risk factor(2) ,Altered amygdala activation(1)  
Details:
  • Target disease:
    Bipolar Disorder (DOID_3312)
    Effect type:
    Pleiotropy 
    Modifier effect:
    Altered amygdala activation 
    Evidence:
    P<0.05 
    Effect:
    The Met158 allele further reduces cortical efficiency in the vlPFC in individuals with affective morbidity.
    Alias in reference:
    COMT:c.472G>A(p.Val158Met)
    Reference:
    Title:
    The impact of the Val158Met catechol-O-methyltransferase genotype on neural correlates of sad facial affect processing in patients with bipolar disorder and their relatives.
    Species studied:
    Human
    Abstract:
    The Met allele of the catechol-O-methyltransferase (COMT) valine-to-methionine (Val158Met) polymorphism is known to affect dopamine-dependent affective regulation within amygdala-prefrontal cortical (PFC) networks. It is also thought to increase the risk of a number of disorders characterized by affective morbidity including bipolar disorder (BD), major depressive disorder (MDD) and anxiety disorders. The disease risk conferred is small, suggesting that this polymorphism represents a modifier locus. Therefore our aim was to investigate how the COMT Val158Met may contribute to phenotypic variation in clinical diagnosis using sad facial affect processing as a probe for its neural action.
  • Target disease:
    Gynaecopathia (No data)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    From review article 
    Effect:
    Homozygous mutant carriage of SNPs predisposing to an elevated risk of early postmenopausal bone loss and osteoporosis, may be a new means to individualize the counseling on risks and benefits of ERT/HRT.
    Alias in reference:
    COMT:p.V158M
    Reference:
    Title:
    Applications of polymorphisms and pharmacogenomics in obstetrics and gynecology.
    Species studied:
    Human
    Abstract:
    The number of reports investigating disease susceptibility based on the carriage of low-penetrance, high-frequency polymorphisms has steadily increased over the last years. Evidence based on meta-analyses of individual case-control studies is accumulating, defining specific individual variations in disease susceptibility. For example, genetic variations of the estradiol metabolism have been described as significant contributors to disease susceptibility with variations depending on ethnic background. In the field of obstetrics and gynecology, the genetic contribution of polymorphic markers to a series of disorders has been characterized. These disorders include recurrent pregnancy loss, pre-eclampsia, endometriosis, breast cancer, and hormone replacement therapy (HRT)-related complications such as thrombosis. Among other genetic markers, thrombophilic genetic variants, such as the Factor V Leiden and prothrombin G20210A polymorphisms, as well as genetic variants of cytochrome P450 (CYP) enzymes, for example, CYP19 and CYP1B1, have been established as genetic risk markers and disease modifiers of recurrent and sporadic pregnancy loss and HRT-independent and -dependent breast cancer, respectively. In addition, meta-analyses of data in the literature established the TGFBR1*6A, GSTP I105V, and TP53 R72P polymorphisms, as well as the GSTM1 gene deletion as low-penetrance genetic risk factors of sporadic breast cancer. With respect to genetic modulation of therapeutic effects, beneficial effects of estrogen replacement therapy and HRT are modulated by the carriage of single nucleotide polymorphisms, for example, osteoprotection and blood lipid changes by the estrogen receptor-alpha (ER-a) PvuII polymorphism. Polymorphisms of the catechol-O-methyltransferase (COMT), ER-alpha, IL-1 receptor antagonist, and Factor V genes have been demonstrated to modulate the timing of natural menopause. Lastly, a strong genetic contribution of polymorphisms to the development and the clinical course of endometriosis has been established with data pointing to polymorphisms of the COMT, GST, NAT-2, and ER-alpha genes as susceptibility markers. In summary, the available evidence points to a number of polymorphisms of a wide variety of genes as strong hereditary determinants of the susceptibility to benign and malignant gynecologic and obstetric conditions.
  • Target disease:
    Neurofibromas (HP:0001067)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    Z=2.58, P=0.030, r = 0.44 
    Effect:
    A significant association of the COMT polymorphism was observed only with verbal working memory
    Alias in reference:
    COMT:Val(158)Met
    Reference:
    Title:
    COMT Val(158)Met Polymorphism Is Associated with Verbal Working Memory in Neurofibromatosis Type 1.
    Species studied:
    Human
    Abstract:
    Neurofibromatosis type I (NF1) is a neurogenetic disease marked by multiple cognitive and learning problems. Genetic variants may account for phenotypic variance in NF1. Here, we investigated the association between the catechol-O-methyltransferase (COMT) Val(158)Met polymorphism and working memory and arithmetic performance in 50 NF1 individuals. A significant association of the COMT polymorphism was observed only with verbal working memory, as measured by the backward digit-span task with an advantageous performance for Met/Met carriers. To study how genetic modifiers influence NF1 cognitive performance might be of importance to decrease the unpredictability of the cognitive profile among NF1 patients.