The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
| 变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
| NC_045512.2:29866:A->AACACGACAGCATC |
2697049 |
NC_045512.2 |
29866 |
A |
AACACGACAGCATC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia |
0‰ |
1
|
| NC_045512.2:29866:A->AGGCAGATGCTGTCGTGTTG |
2697049 |
NC_045512.2 |
29866 |
A |
AGGCAGATGCTGTCGTGTTG |
indel |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia |
0‰ |
1
|
| NC_045512.2:29866:A->AAGCTTGGCACTGATCC |
2697049 |
NC_045512.2 |
29866 |
A |
AAGCTTGGCACTGATCC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia |
0‰ |
1
|
| NC_045512.2:29866:A->ACTGTCGTGTTGTGGCAGATGC |
2697049 |
NC_045512.2 |
29866 |
A |
ACTGTCGTGTTGTGGCAGATGC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia |
0‰ |
1
|
| NC_045512.2:29866:A->AACACGAGCAGCCTC |
2697049 |
NC_045512.2 |
29866 |
A |
AACACGAGCAGCCTC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia |
0‰ |
1
|
| NC_045512.2:29866:A->ACCACAACACGACAGCATC |
2697049 |
NC_045512.2 |
29866 |
A |
ACCACAACACGACAGCATC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia |
0‰ |
1
|
| NC_045512.2:29866:A->AAGATGC |
2697049 |
NC_045512.2 |
29866 |
A |
AAGATGC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia |
0‰ |
1
|
| NC_045512.2:29866:A->AAGCAGTGCGTCTCTG |
2697049 |
NC_045512.2 |
29866 |
A |
AAGCAGTGCGTCTCTG |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
1
|
| NC_045512.2:29866:ATG->A |
2697049 |
NC_045512.2 |
29866 |
ATG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
China |
0.0002‰ |
5
|
| NC_045512.2:29866:AT->A |
2697049 |
NC_045512.2 |
29866 |
AT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
France |
0.0006‰ |
16
|
| NC_045512.2:29866:A->C |
2697049 |
NC_045512.2 |
29866 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,
Slovenia,
France,
Chile,
Russia,
查看全部
|
0.0073‰ |
170
|
| NC_045512.2:29866:A->G |
2697049 |
NC_045512.2 |
29866 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia,
Sweden,
Bangladesh,
United States,
China,
Georgia,
Costa Rica,
查看全部
|
0.0054‰ |
126
|
| NC_045512.2:29866:A->T |
2697049 |
NC_045512.2 |
29866 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Canada,
United States,
China,
Malaysia,
查看全部
|
0.0029‰ |
68
|
| NC_045512.2:29866:A->ACCTCT |
2697049 |
NC_045512.2 |
29866 |
A |
ACCTCT |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
2
|
| NC_045512.2:29865:A->ATTTCCTGTTACCATTAAGATTCT |
2697049 |
NC_045512.2 |
29865 |
A |
ATTTCCTGTTACCATTAAGATTCT |
indel |
downstream |
|
|
|
|
Homo sapiens |
Egypt |
0‰ |
1
|
| NC_045512.2:29865:A->AGCTGCCTAT |
2697049 |
NC_045512.2 |
29865 |
A |
AGCTGCCTAT |
indel |
downstream |
|
|
|
|
Homo sapiens |
France |
0.0001‰ |
3
|
| NC_045512.2:29865:A->AGCTGCCTAAGCTGCCTAT |
2697049 |
NC_045512.2 |
29865 |
A |
AGCTGCCTAAGCTGCCTAT |
indel |
downstream |
|
|
|
|
Homo sapiens |
France |
0‰ |
2
|
| NC_045512.2:29865:A->ACATTATTTCATCTGTTTTCC |
2697049 |
NC_045512.2 |
29865 |
A |
ACATTATTTCATCTGTTTTCC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Malaysia |
0‰ |
1
|
| NC_045512.2:29865:A->AACCACAAC |
2697049 |
NC_045512.2 |
29865 |
A |
AACCACAAC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia |
0‰ |
1
|
| NC_045512.2:29865:A->AAC |
2697049 |
NC_045512.2 |
29865 |
A |
AAC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia |
0‰ |
1
|