Flagellimonas eckloniae Bae et al. 2007
General information
Name
Flagellimonas eckloniae
Valid publication
2007
Nomenclature type
DOKDO 007;JCM 13831
;KCCM 42307
Etymology
N.L. n. <i>Ecklonia</i>, scientific genus name of the marine alga from which the bacterium was isolated; N.L. gen. n. <i>eckloniae</i>, of <i>Ecklonia</i>.
Ecology
Source
isolated from the rhizosphere of the marine alga Ecklonia kurome collected on Dokdo Island, Korea.
Morphology
Cells are rods (0.2-0.36 × 1.1-2.3 µm), motile by means of a single polar flagellum. Gliding motility is not observed Cells form irregular aggregates during growth in MB. After 3 days of incubation on MA at 25°C, colonies are orange-pigmented, opaque, convex and uniformly circular.
Morphology standardized
cell shape | length | width |
---|---|---|
rod | 1.1-2.3 | 0.2-0.36 |
motility |
---|
- |
flagellum | arrangement |
---|---|
+ | polar |
Physiology
Oxygen requirement
obligately aerobic
GC
GC_content |
---|
39 |
Gram
staining |
---|
negative |
Growth temperature
range |
---|
17.0-36.0 |
Growth PH
range |
---|
7.0-9.0 |
2.5-7.0 |
Halophily
optimum |
---|
3.5-4% |
range |
---|
2.7-3.1% |
C/N source
positive results | ||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
sucrose | maltose | D-glucose | D-xylose | lactose | casein | cellobiose | dextrin | lactate | α-D-glucose | L-fucose | D-trehalose | L-aspartate | gentiobiose | D-glucuronate | turanose | D-melibiose | succinate | L-alanyl-glycine | L-alanine | glycyl L-glutamate | β-methyl-D-glucoside | L-leucine | phenylethylamine | 2-ketoglutarate | urocanate | D-raffinose | L-threonine | alaninamide | L-proline | glycogen | L-asparagine | L-glutamate |
negative results | |
---|---|
D-mannitol | starch |
Biochemistry
Fattyacids
Name | Account |
---|---|
ECL 18.056 | 6.5 |
10-methyl C16:0 | 9.2 |
C16:1 ω7c | 6.0 |
C15:0 | 7.0 |
iso-C15:0 | 41.8 |
iso-C15:1 ω10c | 11.4 |
Gelatin hyd
+
H2s pdu
-
Nitrate rdc
-
Quinones
MK-6
Vp test
+
Enzymology
Enzyme | Activity |
---|---|
arginine dihydrolase | - |
catalase | + |
oxidase | - |
urease | - |
β-galactosidase | -.u.+ |
β-glucosidase | -.u.+ |
Taxonomy marker
Genomics
Submitter date: 2015/10/26 00:00 Update date: 2017/07/19 00:00
Source
Korea Institute of Ocean Science and Technology
Coverage
189.9
Assembly status
Contig
Assembly class
haploid
Strain List
References
1
Bae, S.S., Kwon, K.K., Yang, S.H., Lee, H.-S., Kim, S.-J., and Lee, J.-H. Flagellimonas eckloniae gen. nov., sp. nov., a mesophilic marine bacterium of the family Flavobacteriaceae, isolated from the rhizosphere of Ecklonia kurome. Int. J. Syst. Evol. Microbiol. (2007) 57:1050-1054.[DOI:10.1099/ijs.0.64565-0]
[PMID:17473257]
2
Choi, S., Lee, J.H., Kang, J.W., Choe, H.N., and Seong, C.N. Flagellimonas aquimarina sp. nov., and transfer of Spongiibacterium flavum Yoon and Oh 2012 and S. pacificum Gao et al. 2015 to the genus Flagellimonas Bae et al. 2007 as Flagellimonas flava comb. nov. and F. pacifica comb. nov., respectively. Int. J. Syst. Evol. Microbiol. (2018) 68(10):3266-3272.[DOI:10.1099/ijsem.0.002975]
[PMID:30113301]