General Information
- Experiment ID
- OEX001436
- Experiment Name
- NODEX_PLC_1801181518_WGS
- Experiment Type
- Genomic
- Description
- The aim of the current study was to identify genetic and gene expression alterations in the carcinogenesis and development of CHC and ICC in the Chinese population. Unraveling both similar and differing patterns among these subtypes may help to identify personalized medicine approaches that could improve patient survival.
- Protocol
- Whole genome sequencing (WGS) 10 CHC tumor samples & 10 ICC tumor samples
- Used ID
- NODEX06357808  
Experiment information
- Attributes
-
library_strategy WGS library_layout Paired library_selection n/a mate_pair n/a platform Illumina HiSeq 2000 insertion_size 101 - Project
-
1
Project ID Project name Create Date OEP000118 Whole-exome mutational and transcriptional landscapes of combined hepatocellular cholangiocarcinoma and intrahepatic cholangiocarcinoma reveal molecular diversity 2018-01-18 - Samples
-
10
Sample ID Sample Name Organism Tissue Create Date OES004850 CHC1A Homo sapiens liver 2018-01-18 OES004852 CHC2A Homo sapiens liver 2018-01-18 OES004854 CHC3A Homo sapiens liver 2018-01-18 OES004856 CHC4A Homo sapiens liver 2018-01-18 OES004858 CHC5A Homo sapiens liver 2018-01-18 OES004860 CHC6A Homo sapiens liver 2018-01-18 OES004862 CHC7A Homo sapiens liver 2018-01-18 OES004884 ICC8A Homo sapiens liver 2018-01-18 OES004866 CHC9A Homo sapiens liver 2018-01-18 OES004888 ICC10A Homo sapiens liver 2018-01-18 - Runs
-
10
Run ID Run Name Sample Data Num Create Date OER010062 NODER_Zhenhao_1801191329_CHC1A CHC1A 2 2018-01-19 OER010063 NODER_Zhenhao_1801221049_CHC2A CHC2A 2 2018-01-22 OER010064 NODER_Zhenhao_1801221050_CHC3A CHC3A 2 2018-01-22 OER010065 NODER_Zhenhao_1801221052_CHC4A CHC4A 2 2018-01-22 OER010066 NODER_Zhenhao_1801221052_CHC5A CHC5A 2 2018-01-22 OER010067 NODER_Zhenhao_1801221052_CHC6A CHC6A 2 2018-01-22 OER010068 NODER_Zhenhao_1801221054_CHC7A CHC7A 2 2018-01-22 OER010069 NODER_Zhenhao_1801221054_CHC8A ICC8A 2 2018-01-22 OER010070 NODER_Zhenhao_1801221055_CHC9A CHC9A 2 2018-01-22 OER010071 NODER_Zhenhao_1801221055_CHC10A ICC10A 2 2018-01-22
Author Information
- Create Date
- 2018-01-18
- Last Modified
- 2023-12-01
- Submission
- Zhenhao Liu
- SCBIT