General Information
- Experiment ID
- OEX001437
- Experiment Name
- NODEX_PLC_1801181524_RNA
- Experiment Type
- Transcriptomic
- Description
- The aim of the current study was to identify genetic and gene expression alterations in the carcinogenesis and development of CHC and ICC in the Chinese population. Unraveling both similar and differing patterns among these subtypes may help to identify personalized medicine approaches that could improve patient survival.
- Protocol
- RNA-seq 10 pairs CHC samples (tumor & adjacent non-tumor liver tissue) & 8 pairs ICC samples (tumor & adjacent non-tumor liver tissue)
- Used ID
- NODEX06357809  
Experiment information
- Attributes
-
library_strategy RNA-Seq library_layout Paired library_selection RANDOM PCR mate_pair n/a platform Illumina HiSeq 2000 insertion_size 101 - Project
-
1
Project ID Project name Create Date OEP000118 Whole-exome mutational and transcriptional landscapes of combined hepatocellular cholangiocarcinoma and intrahepatic cholangiocarcinoma reveal molecular diversity 2018-01-18 - Samples
-
36
Sample ID Sample Name Organism Tissue Create Date OES004850 CHC1A Homo sapiens liver 2018-01-18 OES004851 CHC1B Homo sapiens liver 2018-01-18 OES004852 CHC2A Homo sapiens liver 2018-01-18 OES004853 CHC2B Homo sapiens liver 2018-01-18 OES004854 CHC3A Homo sapiens liver 2018-01-18 OES004855 CHC3B Homo sapiens liver 2018-01-18 OES004856 CHC4A Homo sapiens liver 2018-01-18 OES004857 CHC4B Homo sapiens liver 2018-01-18 OES004858 CHC5A Homo sapiens liver 2018-01-18 OES004859 CHC5B Homo sapiens liver 2018-01-18 OES004860 CHC6A Homo sapiens liver 2018-01-18 OES004861 CHC6B Homo sapiens liver 2018-01-18 OES004862 CHC7A Homo sapiens liver 2018-01-18 OES004863 CHC7B Homo sapiens liver 2018-01-18 OES004864 CHC8A Homo sapiens liver 2018-01-18 OES004865 CHC8B Homo sapiens liver 2018-01-18 OES004866 CHC9A Homo sapiens liver 2018-01-18 OES004867 CHC9B Homo sapiens liver 2018-01-18 OES004868 CHC10A Homo sapiens liver 2018-01-18 OES004869 CHC10B Homo sapiens liver 2018-01-18 OES004870 ICC1A Homo sapiens liver 2018-01-18 OES004871 ICC1B Homo sapiens liver 2018-01-18 OES004874 ICC3A Homo sapiens liver 2018-01-18 OES004875 ICC3B Homo sapiens liver 2018-01-18 OES004876 ICC4A Homo sapiens liver 2018-01-18 OES004877 ICC4B Homo sapiens liver 2018-01-18 OES004878 ICC5A Homo sapiens liver 2018-01-18 OES004879 ICC5B Homo sapiens liver 2018-01-18 OES004880 ICC6A Homo sapiens liver 2018-01-18 OES004881 ICC6B Homo sapiens liver 2018-01-18 OES004882 ICC7A Homo sapiens liver 2018-01-18 OES004883 ICC7B Homo sapiens liver 2018-01-18 OES004886 ICC9A Homo sapiens liver 2018-01-18 OES004887 ICC9B Homo sapiens liver 2018-01-18 OES004888 ICC10A Homo sapiens liver 2018-01-18 OES004889 ICC10B Homo sapiens liver 2018-01-18 - Runs
-
36
Run ID Run Name Sample Data Num Create Date OER010072 NODER_Zhenhao_1801221056_RNA_CHC1 CHC1A 2 2018-01-22 OER010073 NODER_Zhenhao_1801221056_RNA_CHC1 CHC1B 2 2018-01-22 OER010074 NODER_Zhenhao_1801221058_RNA_CHC2 CHC2A 2 2018-01-22 OER010075 NODER_Zhenhao_1801221058_RNA_CHC2 CHC2B 2 2018-01-22 OER010076 NODER_Zhenhao_1801221059_RNA_CHC3 CHC3A 2 2018-01-22 OER010077 NODER_Zhenhao_1801221059_RNA_CHC3 CHC3B 2 2018-01-22 OER010078 NODER_Zhenhao_1801221101_RNA_CHC4 CHC4A 2 2018-01-22 OER010079 NODER_Zhenhao_1801221101_RNA_CHC4 CHC4B 2 2018-01-22 OER010080 NODER_Zhenhao_1801221102_RNA_CHC5 CHC5A 2 2018-01-22 OER010081 NODER_Zhenhao_1801221102_RNA_CHC5 CHC5B 2 2018-01-22 OER010082 NODER_Zhenhao_1801221103_RNA_CHC6 CHC6A 2 2018-01-22 OER010083 NODER_Zhenhao_1801221103_RNA_CHC6 CHC6B 2 2018-01-22 OER010084 NODER_Zhenhao_1801221105_RNA_CHC7 CHC7A 2 2018-01-22 OER010085 NODER_Zhenhao_1801221105_RNA_CHC7 CHC7B 2 2018-01-22 OER010086 NODER_Zhenhao_1801221108_RNA_CHC8 CHC8A 2 2018-01-22 OER010087 NODER_Zhenhao_1801221108_RNA_CHC8 CHC8B 2 2018-01-22 OER010088 NODER_Zhenhao_1801221110_RNA_CHC9 CHC9A 2 2018-01-22 OER010089 NODER_Zhenhao_1801221110_RNA_CHC9 CHC9B 2 2018-01-22 OER010090 NODER_Zhenhao_1801221111_RNA_CHC10 CHC10A 2 2018-01-22 OER010091 NODER_Zhenhao_1801221111_RNA_CHC10 CHC10B 2 2018-01-22 OER010092 NODER_Zhenhao_1801221112_RNA_ICC1 ICC1A 2 2018-01-22 OER010093 NODER_Zhenhao_1801221112_RNA_ICC1 ICC1B 2 2018-01-22 OER010094 NODER_Zhenhao_1801221116_RNA_ICC3 ICC3A 2 2018-01-22 OER010095 NODER_Zhenhao_1801221116_RNA_ICC3 ICC3B 2 2018-01-22 OER010096 NODER_Zhenhao_1801221116_RNA_ICC4 ICC4A 2 2018-01-22 OER010097 NODER_Zhenhao_1801221116_RNA_ICC4 ICC4B 2 2018-01-22 OER010098 NODER_Zhenhao_1801221117_RNA_ICC5 ICC5A 2 2018-01-22 OER010099 NODER_Zhenhao_1801221117_RNA_ICC5 ICC5B 2 2018-01-22 OER010100 NODER_Zhenhao_1801221118_RNA_ICC6 ICC6A 2 2018-01-22 OER010101 NODER_Zhenhao_1801221118_RNA_ICC6 ICC6B 2 2018-01-22 OER010102 NODER_Zhenhao_1801221122_RNA_ICC7 ICC7A 2 2018-01-22 OER010103 NODER_Zhenhao_1801221122_RNA_ICC7 ICC7B 2 2018-01-22 OER010104 NODER_Zhenhao_1801221123_RNA_ICC9 ICC9A 2 2018-01-22 OER010105 NODER_Zhenhao_1801221123_RNA_ICC9 ICC9B 2 2018-01-22 OER010106 NODER_Zhenhao_1801221124_RNA_ICC10 ICC10A 2 2018-01-22 OER010107 NODER_Zhenhao_1801221124_RNA_ICC10 ICC10B 2 2018-01-22
Author Information
- Create Date
- 2018-01-18
- Last Modified
- 2023-12-01
- Submission
- Zhenhao Liu
- SCBIT