General Information
- Experiment ID
- OEX022859
- Experiment Name
- Metagenomic sequencing of DOES incubation samples
- Experiment Type
- Metagenomic
- Description
- Total microbial genomic DNA of sediment was extracted and purified using the modified SDS-based method for metagenomic sequencing.
- Protocol
- The extracted microbial DNA was processed to construct metagenome shotgun sequencing libraries following the standard Illumina TruSeq DNA Sample Preparation Guide. Each library was sequenced by Illumina NovaSeq 6000 platform (Illumina, USA) with PE150 strategy at Shanghai Personal Biotechnology (Shanghai, China).
Experiment information
- Attributes
-
library_layout Paired mate_pair No library_selection RANDOM library_strategy WGS platform Illumina NovaSeq 6000 - Project
-
1
Project ID Project name Create Date OEP004042 Metagenomics during DOES incubation under different HHP 2023-03-15 - Samples
-
7
Sample ID Sample Name Organism Tissue Create Date OES298843 Dive119_DOES marine sediment metagenome N/A 2023-03-15 OES338105 DY37-II-Dive119-preserved in 70 MPa HP vessel incubated under 0.1 MPa marine sediment metagenome N/A 2023-12-05 OES338109 DY37-II-Dive119-preserved in 70 MPa HP vessel incubated under 115 MPa marine sediment metagenome N/A 2023-12-05 OES338106 DY37-II-Dive119-preserved in 70 MPa HP vessel incubated under 40 MPa marine sediment metagenome N/A 2023-12-05 OES338107 DY37-II-Dive119-preserved in 70 MPa HP vessel incubated under 70 MPa marine sediment metagenome N/A 2023-12-05 OES338108 DY37-II-Dive119-preserved in 70 MPa HP vessel incubated under 90 MPa marine sediment metagenome N/A 2023-12-05 OES298171 DY37-II-Dive119-preserved in 70 MPa HP vessel marine sediment metagenome N/A 2023-03-13 - Runs
-
7
Run ID Run Name Sample Data Num Create Date OER383465 Metagenomic during DOES incubation Dive119_DOES 0 2023-03-15 OER444810 DOES_MG_0.1 DY37-II-Dive119-preserved in 70 MPa HP vessel incubated under 0.1 MPa 2 2023-12-05 OER444811 DOES_MG_115 DY37-II-Dive119-preserved in 70 MPa HP vessel incubated under 115 MPa 2 2023-12-05 OER444812 DOES_MG_40 DY37-II-Dive119-preserved in 70 MPa HP vessel incubated under 40 MPa 2 2023-12-05 OER444813 DOES_MG_70 DY37-II-Dive119-preserved in 70 MPa HP vessel incubated under 70 MPa 2 2023-12-05 OER444814 DOES_MG_90 DY37-II-Dive119-preserved in 70 MPa HP vessel incubated under 90 MPa 2 2023-12-05 OER444815 DOES_MG_initial DY37-II-Dive119-preserved in 70 MPa HP vessel 2 2023-12-05
Author Information
- Create Date
- 2023-03-15
- Last Modified
- 2024-03-03
- Submission
- Yu Zhang