OENC40437 Catalytic biopart Map View
experimental evidence
Name
Organism
Acetoanaerobium sticklandii DSM 519
Optimum pH
Optimum temperature(ºC)
Catalytic functions

1) D-ornithine = (2R,4S)-2,4-diaminopentanoate

D-ornithine
CHEBI: 57668
Formula: C5H13N2O2
=
(2R,4S)-2,4-diaminopentanoate
CHEBI : 58697
Formula: C5H13N2O2
External Links
14893
EC number
  • 5.4.3.5 D-ornithine 4,5-aminomutase.

Bioparts catalyze this reaction

Biopart ID Organisms pH temperature(ºC) km
Qualitative and quantitative parameters:
-

Temperature

Temperature optimum(ºC)
-

pH

pH optimum
-
Organism

Taxonomy

Taxonomy ID
499177
Organism
Acetoanaerobium sticklandii DSM 519
Lineage
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Acetoanaerobium; Acetoanaerobium sticklandii;
Sequence and structure

Protein sequence

Protein ID
OENC40437.p
Xref
Q8VPJ5

Sequence

TESTMEPRTGGAANPKGSRGSRGPSPLAGPSARQLLARLDARPLAARAAVDVAALVRRAGATLRLRRKEAVSVLDSADIEVTDSRLPHATIVDHRPQHRWLETCNAPPQLIQGKAHSAPKPSQASGKAHSAPKPSQASGAMEPRTGGAANPKGSRGSRGPSPLAGPSARQLLARLDARPLAARAAVDVAALVRRAGATLRLRRKEAVSVLDSADIEVTDSRLPHATIVDHRPQHRWLETCNAPPQLIQGKAHSAPKPSQASGKAHSAPKPSQASGAMEPRTGGAANPKGSRGSRGPSPLAGPSARQLLARLDARPLAARAAVDVAALVRRAGATLRLRRKEAVSVLDSADIEVTDSRLPHATIVDHRPQHRWLETCNAPPQLIQGKAHSAPKPSQASGKAHSAPKPSQASGAMEPRTGGAANPKGSRGSRGPSPLAGPSARQLLARLDARPLAARAAVDVAALVRRAGATLRLRRKEAVSVLDSADIEVTDSRLPHATIVDHRPQHRWLETCNAPPQLIQGKAHSAPKPSQASGKAHSAPKPSQASGAMEPRTGGAANPKGSRGSRGPSPLAGPSARQLLARLDARPLAARAAVDVAALVRRAGATLRLRRKEAVSVLDSADIEVTDSRLPHATIVDHRPQHRWLETCNAPPQLIQGKAHSAPKPSQASGKAHSAPKPSQASGAMEPRTGGAANPKGSRGSRGPSPLAGPSARQLLARLDARPLAARAAVDVAALVRRAGATLRLRRKEAVSVLDSADIEVTDSRLPHATIVDHRPQHRWLETCNAPPQLIQGKAHSAPKPSQASGKAHSAPKPSQASGAMEPRTGGAANPKGSRGSRGPSPLAGPSARQLLARLDARPLAARAAVDVAALVRRAGATLRLRRKEAVSVLDSADIEVTDSRLPHATIVDHRPQHRWLETCNAPPQLIQGKAHSAPKPSQASGKAHSAPKPSQASGAMEPRTGGAANPKGSRGSRGPSPLAGPSARQLLARLDARPLAARAAVDVAALVRRAGATLRLRRKEAVSVLDSADIEVTDSRLPHATIVDHRPQHRWLETCNAPPQLIQGKAHSAPKPSQASGKAHSAPKPSQASGAMEPRTGGAANPKGSRGSRGPSPLAGPSARQLLARLDARPLAARAAVDVAALVRRAGATLRLRRKEAVSVLDSADIEVTDSRLPHATIVDHRPQHRWLETCNAPPQLIQGKAHSAPKPSQASGKAHSAPKPSQASGAMEPRTGGAANPKGSRGSRGPSPLAGPSARQLLARLDARPLAARAAVDVAALVRRAGATLRLRRKEAVSVLDSADIEVTDSRLPHATIVDHRPQHRWLETCNAPPQLIQGKAHSAPKPSQASGKAHSAPKPSQASGAMEPRTGGAANPKGSRGSRGPSPLAGPSAR静态页面数据

Protein family

Pfam entry
definition

Protein structure

PDB ID

Nucleotide sequences (Optimized nucleotide sequences according to different chassises)

NT seq ID
OENC40437.n.1
Gene name

Sequence

ASGSDGLJSLKJGOJSIDJIOJG静态数据
References
  1. R Somack; R N Costilow; . 1973: Purification and properties of a pyridoxal phosphate and coenzyme B 12 dependent D- -ornithine 5,4-aminomutase. Biochemistry, 12 2597-604.
  2. H P Chen; S H Wu; Y L Lin; C M Chen; S S Tsay; . 2001: Cloning, sequencing, heterologous expression, purification, and characterization of adenosylcobalamin-dependent D-ornithine aminomutase from Clostridium sticklandii. The Journal of Biological Chemistry, 276 44744-50.
  3. Kirsten R Wolthers; Colin Levy; Nigel S Scrutton; David Leys; . 2010: Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase. The Journal of Biological Chemistry, 285 13942-50.
  4. Nuria Fonknechten; Sébastien Chaussonnerie; Sabine Tricot; Aurélie Lajus; Jan R Andreesen; Nadia Perchat; Eric Pelletier; Michel Gouyvenoux; Valérie Barbe; Marcel Salanoubat; Denis Le Paslier; Jean Weissenbach; Georges N Cohen; Annett Kreimeyer; . 2010: Clostridium sticklandii, a specialist in amino acid degradation:revisiting its metabolism through its genome sequence. BMC Genomics, 11 555.
Uniprot
OAME_ACESD