Gene "RAD51"
Found 6 records
Gene information
Gene symbol:
RAD51
See related:
Ensembl: ENSG00000051180, Gene ID: 5888
Additive variants :
Detected
Genetic interaction partners
Confidence      Stringent (ε>0.16 or ε<-0.12)      Intermediate (-0.16≤ε≤-0.08 or 0.08≤ε≤0.16)      Lenient (|ε|<0.08)
Positive interactions
  • RAD52 
  • XRCC3 
  • RAD54L 
  • WRN 
  • NF1 
  • ATXN2 
  • PXMP2 
  • WDHD1 
  • ACTR6 
  • LSM1 
  • MRE11 
  • DPH7 
  • TBC1D22A 
  • CHMP3 
  • SLC35B1 
  • HDAC7 
  • TXNL1 
  • SLC25A21 
  • GLUD2 
  • STX2 
  • UBL5 
  • MGLL 
  • XPNPEP2 
  • MRPL36 
  • MOCS3 
  • HCFC2 
  • CTU1 
  • EDF1 
  • SLC3A1 
  • PSAT1 
  • SBK1 
  • COG6 
  • GYG1 
  • IMPA2 
  • AGPAT4 
  • GATA2 
  • SIN3A 
  • PPAN 
  • TDP1 
  • URM1 
  • DNPEP 
  • PELO 
  • ASNS 
  • PSPH 
  • TOMM70 
  • VPS26B 
  • USP41 
  • PFDN4 
  • GOLT1A 
  • UBR3 
  • ERMP1 
  • SNAPC4 
  • EPN3 
  • RBM22 
  • ATG5 
  • PAN3 
  • SETD6 
  • HCFC2 
  • EEF1A2 
  • AP3S2 
  • BUB1B 
  • VAMP2 
  • VPS13D 
  • SH3YL1 
  • NSUN5 
  • CRLS1 
  • TCP11L2 
  • TMED9 
  • RPS25 
  • PGLS 
  • PTRH2 
  • GYS1 
  • TREH 
  • VPS29 
  • ZFAND1 
  • CTSA 
  • ANKRD55 
  • TRIP12 
  • DNAJC5B 
Negative interactions
  • POLI 
  • PRDX1 
  • REV3L 
  • GEN1 
  • LSM7 
  • HELLS 
  • DGAT1 
  • RPS27 
  • SIGMAR1 
  • GPX7 
  • SLC38A7 
  • ISCU 
  • WDR76 
  • ELOVL1 
  • PIAS1 
  • PFDN6 
  • HSP90B1 
  • DCLRE1B 
  • RRAGA 
  • PSMD4 
  • TTF2 
  • TTF2 
  • PPP6C 
  • BUD31 
  • PPP2CB 
  • PSMA4 
  • MAP3K4 
  • PGLS 
  • PEF1 
  • ALPL 
  • PRDX6 
  • CYB5B 
  • PGRMC2 
  • SRM 
  • GK5 
  • FOXJ3 
  • CNIH3 
  • RPL26 
  • UBE4B 
  • CWF19L1 
  • FIS1 
  • EEF1G 
  • PGLS 
  • IMPA2 
  • ATAD1 
  • ERCC6 
  • CDC25B 
  • UNG 
  • BRSK1 
  • GAPDH 
  • SBF1 
  • CHAF1B 
  • TXNRD1 
  • RABL2B 
  • PABPN1 
  • ADHFE1 
  • NFU1 
  • SAC3D1 
  • UBE2V2 
  • AP3D1 
  • RAB5B 
  • PPP6R3 
  • SLC13A4 
  • STK16 
  • ATAD2 
  • RRP8 
  • NKTR 
  • SLC2A10 
  • DRG2 
  • GLRX2 
  • EGR3 
  • DYNC2H1 
  • DPP6 
  • CHTF18 
  • COQ2 
  • CAMK2D 
  • TREH 
  • CHPT1 
  • SLC47A2 
  • PRMT8 
  • FBP1 
  • GPT 
  • RPL11 
  • CWH43 
  • MGAM2 
  • OVCA2 
  • EMC4 
  • REEP4 
Modifier statisitcs
Record:
Disorder:
Vriant:
Reference:
Effect type:
Expressivity(6)  
Modifier effect:
Risk factor(6)  
Details:
  • Variant 1:
    Gene:
    Genomic location:
    dbSNP ID:
    Alias:
    RAD51:c.G135C, RAD51:c.135-1G>C
    Target disease:
    Breast Cancer(DOID_1612)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    OR=0.52; 95% CI: 0.2-1.33 
    Effect:
    These findings suggest that the effect of the RAD51 C allele is an important risk modifier for malignancies occurring on a background of BRCA1 mutations.
    Reference:
    Title:
    The RAD51 135 G>C polymorphism modifies breast cancer and ovarian cancer risk in Polish BRCA1 mutation carriers.
    Species studied:
    Human
    Abstract:
    Breast and ovarian cancer penetrance in BRCA1 mutation carriers is estimated to be between 15% and 80% by age 70 years. At present, it is not possible to predict with any certainty who is most likely to develop disease or which age it will develop. Previous studies have tried to correlate the sites of BRCA1 mutations with disease risk; however, the results have not yielded any definitive association. An alternative explanation that could account for differences in the penetrance of BRCA1 mutations is the action of modifier genes. In this study, we have investigated the role of the RAD51_135_G>C polymorphism in breast and ovarian cancer case-control populations of Polish women who have been matched for BRCA1 mutation and year of birth. The results reveal that women who harbor the C allele have almost twice the reduction in breast and ovarian cancer risk compared with women who harbor only the G allele. These findings suggest that the effect of the RAD51 C allele is an important risk modifier for malignancies occurring on a background of BRCA1 mutations. In addition, we were able to show that the site of the BRCA1 mutation does not influence the effect of the RAD51 C allele, indicating that this polymorphism contributes to prevention of disease in BRCA1 carriers. In conclusion, the RAD51 C allele seems to protect against both breast and ovarian cancer in women harboring BRCA1 mutations.
  • Variant 2:
    Gene:
    Genomic location:
    dbSNP ID:
    Alias:
    RAD51:c.G135C, RAD51:c.135-1G>C
    Target disease:
    Breast Cancer(DOID_1612)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    (adjusted odds ratio, 3.2; 95% confidence limit, 1.4-40) 
    Effect:
    We have identified a RAD51 5' untranslated region SNP that may be associated with an increased risk of breast cancer and a lower risk of ovarian cancer among BRCA2 mutation carriers
    Reference:
    Title:
    A single nucleotide polymorphism in the 5' untranslated region of RAD51 and risk of cancer among BRCA1/2 mutation carriers.
    Species studied:
    Human
    Abstract:
    RAD51 colocalizes with both BRCA1 and BRCA2, and genetic variants in RAD51 would be candidate BRCA1/2 modifiers. We searched for RAD51 polymorphisms by sequencing 20 individuals. We compared the polymorphism allele frequencies between female BRCA1/2 mutation carriers with and without breast or ovarian cancer and between population-based ovarian cancer cases with BRCA1/2 mutations to cases and controls without mutations. We discovered two single nucleotide polymorphisms (SNPs) at positions 135 g-->c and 172 g-->t of the 5' untranslated region. In an initial group of BRCA1/2 mutation carriers, 14 (21%) of 67 breast cancer cases carried a c allele at RAD51:135 g-->c, whereas 8 (7%) of 119 women without breast cancer carried this allele. In a second set of 466 mutation carriers from three centers, the association of RAD51:135 g-->c with breast cancer risk was not confirmed. Analyses restricted to the 216 BRCA2 mutation carriers, however, showed a statistically significant association of the 135 c allele with the risk of breast cancer (adjusted odds ratio, 3.2; 95% confidence limit, 1.4-40). BRCA1/2 mutation carriers with ovarian cancer were only about one half as likely to carry the RAD51:135 g-->c SNP. Analysis of the RAD51:135 g-->c SNP in 738 subjects from an Israeli ovarian cancer case-control study was consistent with a lower risk of ovarian cancer among BRCA1/2 mutation carriers with the c allele. We have identified a RAD51 5' untranslated region SNP that may be associated with an increased risk of breast cancer and a lower risk of ovarian cancer among BRCA2 mutation carriers. The biochemical basis of this risk modifier is currently unknown.
  • Variant 3:
    Gene:
    Genomic location:
    dbSNP ID:
    Alias:
    RAD51:c.G135C, RAD51:c.135-1G>C
    Target disease:
    Breast Cancer(DOID_1612)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    OR=0.23; 95% CI: 0.07-0.62; P=0.0015 
    Effect:
    RAD51 is a genetic modifier of breast cancer risk in BRCA1 carriers in the Polish population.
    Reference:
    Title:
    Breast cancer risk reduction associated with the RAD51 polymorphism among carriers of the BRCA1 5382insC mutation in Poland.
    Species studied:
    Human
    Abstract:
    The observed heterogeneity of breast cancer risk among women who carry the same BRCA1 mutation suggests the existence of modifying environmental and genetic factors. The product of the RAD51 gene functions with BRCA1 and BRCA2 in the repair of double-stranded DNA breaks. To establish whether polymorphic variation of RAD51 modifies risk for hereditary breast cancer, we conducted a matched case-control study on 83 pairs of female carriers of the BRCA1 5382insC mutation. Cases consisted of women with breast cancer, and controls were women with the same mutation but who were unaffected. The frequency of the RAD51 135C variant allele was established in cases and controls using RFLP-PCR. The RAD51 135C allele was detected in 37% of unaffected and in 17% of affected BRCA1 carriers. Among 27 discordant matched pairs, the RAD51 135C allele was found in the healthy carrier on 22 occasions and in the affected carrier on only five occasions (odds ratio = 0.23; 95% confidence interval, 0.07-0.62; P = 0.0015). This finding suggests that RAD51 is a genetic modifier of breast cancer risk in BRCA1 carriers in the Polish population. It will be of interest to confirm this in other populations as well.
  • Variant 4:
    Gene:
    Genomic location:
    dbSNP ID:
    Alias:
    RAD51:c.G135C, RAD51:c.135-1G>C
    Target disease:
    Hereditary Breast Cancer(Orphanet_227535)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    OR=2.17, 95% CI: 1.19-3.98; P=0.012 
    Effect:
    Associated with the risk of cancer
    Reference:
    Title:
    DNA repair polymorphisms might contribute differentially on familial and sporadic breast cancer susceptibility: a study on a Portuguese population.
    Species studied:
    Human
    Abstract:
    The purpose of this study was to evaluate the role of polymorphisms in DNA repair genes as genetic indicators of susceptibility to familial and sporadic breast cancer. We analysed DNA samples from 285 breast cancer patients and 442 control subjects, for XRCC1 Arg399Gln, XPD Lys751Gln, RAD51 G135C and XRCC3 Thr241Met polymorphisms using PCR-RFLP. We observed that women carriers of XRCC1 399Gln genotypes and without family history of breast cancer have a protective effect concerning this disease (OR = 0.54 95% CI 0.35-0.84; p = 0.006). Furthermore, we found that carriers of XRCC3 241Met genotypes without FH have an increased susceptibility of breast cancer (OR = 2.21 95% CI 1.42-3.44; p < 0.001). Additionally, we verified an increased risk of breast cancer in women with FH and carrying RAD51 135C genotypes (OR = 2.17 95% CI 1.19-3.98; p = 0.012). Our results suggest XRCC1 Arg399Gln and XRCC3 Thr241Met DNA repair polymorphisms as important biomarkers to sporadic breast cancer susceptibility, as well as, RAD51 G135C polymorphism as a real risk modifier in familial breast cancer cases.
  • Variant 5:
    Gene:
    Genomic location:
    dbSNP ID:
    Alias:
    RAD51:c.G135C, RAD51:c.135-1G>C
    Target disease:
    Ovarian Cancer(DOID_2394)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    OR=0.38; 95% CI: 0.18-0.82 
    Effect:
    These findings suggest that the effect of the RAD51 C allele is an important risk modifier for malignancies occurring on a background of BRCA1 mutations.
    Reference:
    Title:
    The RAD51 135 G>C polymorphism modifies breast cancer and ovarian cancer risk in Polish BRCA1 mutation carriers.
    Species studied:
    Human
    Abstract:
    Breast and ovarian cancer penetrance in BRCA1 mutation carriers is estimated to be between 15% and 80% by age 70 years. At present, it is not possible to predict with any certainty who is most likely to develop disease or which age it will develop. Previous studies have tried to correlate the sites of BRCA1 mutations with disease risk; however, the results have not yielded any definitive association. An alternative explanation that could account for differences in the penetrance of BRCA1 mutations is the action of modifier genes. In this study, we have investigated the role of the RAD51_135_G>C polymorphism in breast and ovarian cancer case-control populations of Polish women who have been matched for BRCA1 mutation and year of birth. The results reveal that women who harbor the C allele have almost twice the reduction in breast and ovarian cancer risk compared with women who harbor only the G allele. These findings suggest that the effect of the RAD51 C allele is an important risk modifier for malignancies occurring on a background of BRCA1 mutations. In addition, we were able to show that the site of the BRCA1 mutation does not influence the effect of the RAD51 C allele, indicating that this polymorphism contributes to prevention of disease in BRCA1 carriers. In conclusion, the RAD51 C allele seems to protect against both breast and ovarian cancer in women harboring BRCA1 mutations.
  • Variant 6:
    Gene:
    Genomic location:
    dbSNP ID:
    Alias:
    RAD51:c.G135C, RAD51:c.135-1G>C
    Target disease:
    Ovarian Cancer(DOID_2394)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    P<0.05 
    Effect:
    We have identified a RAD51 5' untranslated region SNP that may be associated with an increased risk of breast cancer and a lower risk of ovarian cancer among BRCA2 mutation carriers
    Reference:
    Title:
    A single nucleotide polymorphism in the 5' untranslated region of RAD51 and risk of cancer among BRCA1/2 mutation carriers.
    Species studied:
    Human
    Abstract:
    RAD51 colocalizes with both BRCA1 and BRCA2, and genetic variants in RAD51 would be candidate BRCA1/2 modifiers. We searched for RAD51 polymorphisms by sequencing 20 individuals. We compared the polymorphism allele frequencies between female BRCA1/2 mutation carriers with and without breast or ovarian cancer and between population-based ovarian cancer cases with BRCA1/2 mutations to cases and controls without mutations. We discovered two single nucleotide polymorphisms (SNPs) at positions 135 g-->c and 172 g-->t of the 5' untranslated region. In an initial group of BRCA1/2 mutation carriers, 14 (21%) of 67 breast cancer cases carried a c allele at RAD51:135 g-->c, whereas 8 (7%) of 119 women without breast cancer carried this allele. In a second set of 466 mutation carriers from three centers, the association of RAD51:135 g-->c with breast cancer risk was not confirmed. Analyses restricted to the 216 BRCA2 mutation carriers, however, showed a statistically significant association of the 135 c allele with the risk of breast cancer (adjusted odds ratio, 3.2; 95% confidence limit, 1.4-40). BRCA1/2 mutation carriers with ovarian cancer were only about one half as likely to carry the RAD51:135 g-->c SNP. Analysis of the RAD51:135 g-->c SNP in 738 subjects from an Israeli ovarian cancer case-control study was consistent with a lower risk of ovarian cancer among BRCA1/2 mutation carriers with the c allele. We have identified a RAD51 5' untranslated region SNP that may be associated with an increased risk of breast cancer and a lower risk of ovarian cancer among BRCA2 mutation carriers. The biochemical basis of this risk modifier is currently unknown.