The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
| 变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
| NC_045512.2:29763:AGTGAAC->A |
2697049 |
NC_045512.2 |
29763 |
AGTGAAC |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Luxembourg |
0‰ |
1
|
| NC_045512.2:29763:A->GTCAACATCTTAAAGATGGCACTT |
2697049 |
NC_045512.2 |
29763 |
A |
GTCAACATCTTAAAGATGGCACTT |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
1
|
| NC_045512.2:29763:A->C |
2697049 |
NC_045512.2 |
29763 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0044‰ |
103
|
| NC_045512.2:29763:AGTG->A |
2697049 |
NC_045512.2 |
29763 |
AGTG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0004‰ |
11
|
| NC_045512.2:29763:A->G |
2697049 |
NC_045512.2 |
29763 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0022‰ |
52
|
| NC_045512.2:29763:A->T |
2697049 |
NC_045512.2 |
29763 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Australia |
0.0009‰ |
23
|
| NC_045512.2:29762:CAGTGAACAATGCTA->T |
2697049 |
NC_045512.2 |
29762 |
CAGTGAACAATGCTA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
| NC_045512.2:29762:CAGT->C |
2697049 |
NC_045512.2 |
29762 |
CAGT |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Africa |
0‰ |
1
|
| NC_045512.2:29762:CAGTG->T |
2697049 |
NC_045512.2 |
29762 |
CAGTG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
| NC_045512.2:29762:CAGTG->T |
2697049 |
NC_045512.2 |
29762 |
CAGTG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
| NC_045512.2:29762:CA->C |
2697049 |
NC_045512.2 |
29762 |
CA |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0‰ |
2
|
| NC_045512.2:29762:C->A |
2697049 |
NC_045512.2 |
29762 |
C |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0006‰ |
14
|
| NC_045512.2:29762:CAG->T |
2697049 |
NC_045512.2 |
29762 |
CAG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Jordan |
0.0001‰ |
4
|
| NC_045512.2:29762:CAGTGAACA->C |
2697049 |
NC_045512.2 |
29762 |
CAGTGAACA |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Arab Emirates |
0‰ |
1
|
| NC_045512.2:29762:C->G |
2697049 |
NC_045512.2 |
29762 |
C |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0017‰ |
41
|
| NC_045512.2:29762:C->T |
2697049 |
NC_045512.2 |
29762 |
C |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,United Kingdom,Italy |
0.0655‰ |
1509
|
| NC_045512.2:29761:A->AT |
2697049 |
NC_045512.2 |
29761 |
A |
AT |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0‰ |
1
|
| NC_045512.2:29761:ACAGTGAACAAT->A |
2697049 |
NC_045512.2 |
29761 |
ACAGTGAACAAT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.001‰ |
25
|
| NC_045512.2:29761:AC->A |
2697049 |
NC_045512.2 |
29761 |
AC |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Jordan |
0.0002‰ |
5
|
| NC_045512.2:29761:A->G |
2697049 |
NC_045512.2 |
29761 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Australia |
0.0059‰ |
136
|