The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
| 变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
| NC_045512.2:29772:TGC->T |
2697049 |
NC_045512.2 |
29772 |
TGC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Australia |
0.0066‰ |
153
|
| NC_045512.2:29772:T->A |
2697049 |
NC_045512.2 |
29772 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.001‰ |
23
|
| NC_045512.2:29772:T->C |
2697049 |
NC_045512.2 |
29772 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Austria,United Kingdom |
0.0043‰ |
101
|
| NC_045512.2:29771:AT->A |
2697049 |
NC_045512.2 |
29771 |
AT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
| NC_045512.2:29771:A->T |
2697049 |
NC_045512.2 |
29771 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0019‰ |
44
|
| NC_045512.2:29771:A->C |
2697049 |
NC_045512.2 |
29771 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,United Kingdom |
0.0008‰ |
19
|
| NC_045512.2:29771:A->G |
2697049 |
NC_045512.2 |
29771 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.1928‰ |
4435
|
| NC_045512.2:29770:AATGCTAGGGAGAGCTG->A |
2697049 |
NC_045512.2 |
29770 |
AATGCTAGGGAGAGCTG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Germany |
0‰ |
1
|
| NC_045512.2:29770:AATGCTAGGGAGAGCTGCCTATATGGAAG->A |
2697049 |
NC_045512.2 |
29770 |
AATGCTAGGGAGAGCTGCCTATATGGAAG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Chile |
0‰ |
1
|
| NC_045512.2:29770:A->C |
2697049 |
NC_045512.2 |
29770 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Japan |
0.0004‰ |
10
|
| NC_045512.2:29770:A->G |
2697049 |
NC_045512.2 |
29770 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.003‰ |
71
|
| NC_045512.2:29770:AATGCTAG->A |
2697049 |
NC_045512.2 |
29770 |
AATGCTAG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Peru |
0‰ |
1
|
| NC_045512.2:29770:A->T |
2697049 |
NC_045512.2 |
29770 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0028‰ |
66
|
| NC_045512.2:29769:C->TTGAA |
2697049 |
NC_045512.2 |
29769 |
C |
TTGAA |
indel |
downstream |
|
|
|
|
Homo sapiens |
Switzerland |
0‰ |
1
|
| NC_045512.2:29769:CAATGCTAGGG->C |
2697049 |
NC_045512.2 |
29769 |
CAATGCTAGGG |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Chile |
0‰ |
1
|
| NC_045512.2:29769:C->G |
2697049 |
NC_045512.2 |
29769 |
C |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0002‰ |
6
|
| NC_045512.2:29769:CA->C |
2697049 |
NC_045512.2 |
29769 |
CA |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Australia |
0‰ |
1
|
| NC_045512.2:29769:CAATGCT->C |
2697049 |
NC_045512.2 |
29769 |
CAATGCT |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Norway |
0.0002‰ |
6
|
| NC_045512.2:29769:C->CA |
2697049 |
NC_045512.2 |
29769 |
C |
CA |
indel |
downstream |
|
|
|
|
Homo sapiens |
Australia |
0‰ |
1
|
| NC_045512.2:29769:C->A |
2697049 |
NC_045512.2 |
29769 |
C |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh |
0.0021‰ |
49
|