The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29759:G->ACTAATTAC |
2697049 |
NC_045512.2 |
29759 |
G |
ACTAATTAC |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0038‰ |
89
|
NC_045512.2:29759:G->A |
2697049 |
NC_045512.2 |
29759 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Peru |
0.0132‰ |
304
|
NC_045512.2:29759:GT->G |
2697049 |
NC_045512.2 |
29759 |
GT |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
1
|
NC_045512.2:29759:GTACAGTGAACAATGCTA->G |
2697049 |
NC_045512.2 |
29759 |
GTACAGTGAACAATGCTA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0001‰ |
3
|
NC_045512.2:29759:GTACAGTGAACAA->G |
2697049 |
NC_045512.2 |
29759 |
GTACAGTGAACAA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Belgium |
0‰ |
1
|
NC_045512.2:29759:GTA->G |
2697049 |
NC_045512.2 |
29759 |
GTA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0018‰ |
42
|
NC_045512.2:29759:G->T |
2697049 |
NC_045512.2 |
29759 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Austria,United Kingdom |
0.0328‰ |
756
|
NC_045512.2:29759:GTACAGTGAA->G |
2697049 |
NC_045512.2 |
29759 |
GTACAGTGAA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Australia |
0.0003‰ |
9
|
NC_045512.2:29758:T->TGTACAGTGAACAATGCTA |
2697049 |
NC_045512.2 |
29758 |
T |
TGTACAGTGAACAATGCTA |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29758:TGTACAGTGAA->T |
2697049 |
NC_045512.2 |
29758 |
TGTACAGTGAA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29758:TGTACAGTGAACAATGCTA->T |
2697049 |
NC_045512.2 |
29758 |
TGTACAGTGAACAATGCTA |
T |
indel |
downstream |
|
|
|
|
Human |
United States |
0.0001‰ |
4
|
NC_045512.2:29758:TGTACAGTG->T |
2697049 |
NC_045512.2 |
29758 |
TGTACAGTG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom,Italy |
0.0006‰ |
15
|
NC_045512.2:29758:TGTA->T |
2697049 |
NC_045512.2 |
29758 |
TGTA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
2
|
NC_045512.2:29758:TGTACA->T |
2697049 |
NC_045512.2 |
29758 |
TGTACA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Spain |
0.0001‰ |
3
|
NC_045512.2:29758:TG->T |
2697049 |
NC_045512.2 |
29758 |
TG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Australia |
0‰ |
1
|
NC_045512.2:29758:TGTACAGTGAACAATGCTAG->T |
2697049 |
NC_045512.2 |
29758 |
TGTACAGTGAACAATGCTAG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0018‰ |
43
|
NC_045512.2:29758:T->G |
2697049 |
NC_045512.2 |
29758 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
South Africa |
0.0004‰ |
11
|
NC_045512.2:29758:T->A |
2697049 |
NC_045512.2 |
29758 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0043‰ |
99
|
NC_045512.2:29758:T->C |
2697049 |
NC_045512.2 |
29758 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0067‰ |
155
|
NC_045512.2:29757:GT->G |
2697049 |
NC_045512.2 |
29757 |
GT |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|