The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29754:C->T |
2697049 |
NC_045512.2 |
29754 |
C |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Greece,
Belgium,
United States,
Denmark,
United Kingdom,
Scotland,
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|
0.1491‰ |
3430
|
NC_045512.2:29754:C->G |
2697049 |
NC_045512.2 |
29754 |
C |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0.0013‰ |
31
|
NC_045512.2:29753:TCGAG->T |
2697049 |
NC_045512.2 |
29753 |
TCGAG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0001‰ |
4
|
NC_045512.2:29753:TCGAGTGTACAGTGAACAATG->T |
2697049 |
NC_045512.2 |
29753 |
TCGAGTGTACAGTGAACAATG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Israel |
0‰ |
1
|
NC_045512.2:29753:TCGAGTGTACAGTGAACAATGC->T |
2697049 |
NC_045512.2 |
29753 |
TCGAGTGTACAGTGAACAATGC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Germany |
0‰ |
1
|
NC_045512.2:29753:TC->T |
2697049 |
NC_045512.2 |
29753 |
TC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Australia |
0.0001‰ |
3
|
NC_045512.2:29753:T->G |
2697049 |
NC_045512.2 |
29753 |
T |
G |
snv |
downstream |
|
|
|
|
Human |
United States |
0.0006‰ |
15
|
NC_045512.2:29753:T->C |
2697049 |
NC_045512.2 |
29753 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom,Scotland |
0.0165‰ |
381
|
NC_045512.2:29753:T->A |
2697049 |
NC_045512.2 |
29753 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0.0003‰ |
8
|
NC_045512.2:29752:ATCGAGTGTACAGTG->A |
2697049 |
NC_045512.2 |
29752 |
ATCGAGTGTACAGTG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
2
|
NC_045512.2:29752:ATCGAGTGTACAGT->A |
2697049 |
NC_045512.2 |
29752 |
ATCGAGTGTACAGT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Israel |
0‰ |
1
|
NC_045512.2:29752:ATCGAGTG->A |
2697049 |
NC_045512.2 |
29752 |
ATCGAGTG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Turkey |
0‰ |
1
|
NC_045512.2:29752:ATCGAG->A |
2697049 |
NC_045512.2 |
29752 |
ATCGAG |
A |
indel |
downstream |
|
|
|
|
Human |
New Zealand |
0.0004‰ |
11
|
NC_045512.2:29752:A->C |
2697049 |
NC_045512.2 |
29752 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0003‰ |
8
|
NC_045512.2:29752:ATCGAGTGTACAGT->G |
2697049 |
NC_045512.2 |
29752 |
ATCGAGTGTACAGT |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
1
|
NC_045512.2:29752:AT->A |
2697049 |
NC_045512.2 |
29752 |
AT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0001‰ |
4
|
NC_045512.2:29752:A->T |
2697049 |
NC_045512.2 |
29752 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0057‰ |
133
|
NC_045512.2:29752:A->G |
2697049 |
NC_045512.2 |
29752 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
SAUDI ARABIA |
0.0166‰ |
384
|
NC_045512.2:29751:GATCGAGTGTACAGTGAA->G |
2697049 |
NC_045512.2 |
29751 |
GATCGAGTGTACAGTGAA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0‰ |
1
|
NC_045512.2:29751:GATCGAGTGTACAGTGA->G |
2697049 |
NC_045512.2 |
29751 |
GATCGAGTGTACAGTGA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0‰ |
2
|