The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
| 变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
| NC_045512.2:29732:CCGAGG->C |
2697049 |
NC_045512.2 |
29732 |
CCGAGG |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0.0002‰ |
6
|
| NC_045512.2:29732:CCGAGGCCA->C |
2697049 |
NC_045512.2 |
29732 |
CCGAGGCCA |
C |
indel |
downstream |
|
|
|
|
Human |
Netherlands |
0‰ |
1
|
| NC_045512.2:29732:CCGAGGCCACGCGGAGTACGATCGAGTGT->C |
2697049 |
NC_045512.2 |
29732 |
CCGAGGCCACGCGGAGTACGATCGAGTGT |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0004‰ |
11
|
| NC_045512.2:29732:CCGAGGCCACGCGGAGTACGATCGAGTGTA->C |
2697049 |
NC_045512.2 |
29732 |
CCGAGGCCACGCGGAGTACGATCGAGTGTA |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0006‰ |
16
|
| NC_045512.2:29732:CCGAGGCCACGCGGAGTA->C |
2697049 |
NC_045512.2 |
29732 |
CCGAGGCCACGCGGAGTA |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0003‰ |
7
|
| NC_045512.2:29732:C->A |
2697049 |
NC_045512.2 |
29732 |
C |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Australia |
0.0016‰ |
37
|
| NC_045512.2:29732:CCGAGGCCACGCGGAGTACGAT->C |
2697049 |
NC_045512.2 |
29732 |
CCGAGGCCACGCGGAGTACGAT |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States,United Kingdom |
0.0019‰ |
44
|
| NC_045512.2:29732:C->G |
2697049 |
NC_045512.2 |
29732 |
C |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0003‰ |
8
|
| NC_045512.2:29732:C->T |
2697049 |
NC_045512.2 |
29732 |
C |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,
China,
Australia,
France,
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|
0.0159‰ |
367
|
| NC_045512.2:29731:ACCGAGGCCACGCGGAGTACGATCGAGT->A |
2697049 |
NC_045512.2 |
29731 |
ACCGAGGCCACGCGGAGTACGATCGAGT |
A |
indel |
downstream |
|
|
|
|
Human |
Canada |
0‰ |
1
|
| NC_045512.2:29731:ACCGAGGCCACGCGGAGT->A |
2697049 |
NC_045512.2 |
29731 |
ACCGAGGCCACGCGGAGT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
France |
0.0001‰ |
4
|
| NC_045512.2:29731:ACCGAGGCCACGCGGAGTACG->A |
2697049 |
NC_045512.2 |
29731 |
ACCGAGGCCACGCGGAGTACG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0‰ |
2
|
| NC_045512.2:29731:ACCGAGGCCACG->A |
2697049 |
NC_045512.2 |
29731 |
ACCGAGGCCACG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Germany |
0‰ |
2
|
| NC_045512.2:29731:ACCGAGGCCACGCGGAGTACGATCGAGTG->A |
2697049 |
NC_045512.2 |
29731 |
ACCGAGGCCACGCGGAGTACGATCGAGTG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
1
|
| NC_045512.2:29731:A->AATTCAATGCTAGG |
2697049 |
NC_045512.2 |
29731 |
A |
AATTCAATGCTAGG |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Africa |
0‰ |
1
|
| NC_045512.2:29731:A->C |
2697049 |
NC_045512.2 |
29731 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0003‰ |
9
|
| NC_045512.2:29731:ACCGAGG->A |
2697049 |
NC_045512.2 |
29731 |
ACCGAGG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0003‰ |
8
|
| NC_045512.2:29731:A->G |
2697049 |
NC_045512.2 |
29731 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Uruguay,Australia,Russia |
0.003‰ |
70
|
| NC_045512.2:29731:A->T |
2697049 |
NC_045512.2 |
29731 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,China |
0.0053‰ |
123
|
| NC_045512.2:29730:CACCGAGGCCACGCGGAGTACGAT->C |
2697049 |
NC_045512.2 |
29730 |
CACCGAGGCCACGCGGAGTACGAT |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Egypt |
0‰ |
1
|