The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
| 变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
| NC_045512.2:29730:CACCGAGGCCACGCGGAGTACGATCGAGTG->C |
2697049 |
NC_045512.2 |
29730 |
CACCGAGGCCACGCGGAGTACGATCGAGTG |
C |
indel |
downstream |
|
|
|
|
Human |
Canada |
0‰ |
1
|
| NC_045512.2:29730:CACCGAGG->C |
2697049 |
NC_045512.2 |
29730 |
CACCGAGG |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Netherlands |
0.0002‰ |
5
|
| NC_045512.2:29730:CACCGAGGCCACG->C |
2697049 |
NC_045512.2 |
29730 |
CACCGAGGCCACG |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Portugal |
0‰ |
1
|
| NC_045512.2:29730:CACCGAGGCCACGCGGAGTACG->C |
2697049 |
NC_045512.2 |
29730 |
CACCGAGGCCACGCGGAGTACG |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0‰ |
1
|
| NC_045512.2:29730:CACCGAGGCCACGCGGAGTACGATCGAGT->C |
2697049 |
NC_045512.2 |
29730 |
CACCGAGGCCACGCGGAGTACGATCGAGT |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
2
|
| NC_045512.2:29730:C->A |
2697049 |
NC_045512.2 |
29730 |
C |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0019‰ |
46
|
| NC_045512.2:29730:C->G |
2697049 |
NC_045512.2 |
29730 |
C |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0023‰ |
53
|
| NC_045512.2:29730:C->T |
2697049 |
NC_045512.2 |
29730 |
C |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,United Kingdom,Russia |
0.0475‰ |
1093
|
| NC_045512.2:29729:TCACCGAGGCCAC->T |
2697049 |
NC_045512.2 |
29729 |
TCACCGAGGCCAC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Belgium |
0‰ |
2
|
| NC_045512.2:29729:TCACCGAGGCCACGCGGAG->T |
2697049 |
NC_045512.2 |
29729 |
TCACCGAGGCCACGCGGAG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
2
|
| NC_045512.2:29729:TCACCGAGGC->T |
2697049 |
NC_045512.2 |
29729 |
TCACCGAGGC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
2
|
| NC_045512.2:29729:TCACCGAGGCCACGCGGAGTACGATCGA->T |
2697049 |
NC_045512.2 |
29729 |
TCACCGAGGCCACGCGGAGTACGATCGA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
| NC_045512.2:29729:TCACCGAGGCCACGCGGAGTA->C |
2697049 |
NC_045512.2 |
29729 |
TCACCGAGGCCACGCGGAGTA |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0‰ |
1
|
| NC_045512.2:29729:TCACCGAGGCCACGCGGAGTACG->T |
2697049 |
NC_045512.2 |
29729 |
TCACCGAGGCCACGCGGAGTACG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Denmark |
0.0008‰ |
19
|
| NC_045512.2:29729:TCACCGAGGCCACG->T |
2697049 |
NC_045512.2 |
29729 |
TCACCGAGGCCACG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Denmark |
0.0001‰ |
3
|
| NC_045512.2:29729:T->TCGTCCGTGTTGCAGCCGATCATCAGCA |
2697049 |
NC_045512.2 |
29729 |
T |
TCGTCCGTGTTGCAGCCGATCATCAGCA |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
1
|
| NC_045512.2:29729:TCACCGA->T |
2697049 |
NC_045512.2 |
29729 |
TCACCGA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Spain |
0‰ |
1
|
| NC_045512.2:29729:TCA->T |
2697049 |
NC_045512.2 |
29729 |
TCA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0002‰ |
5
|
| NC_045512.2:29729:TC->T |
2697049 |
NC_045512.2 |
29729 |
TC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0006‰ |
16
|
| NC_045512.2:29729:TCAC->T |
2697049 |
NC_045512.2 |
29729 |
TCAC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Arab Emirates |
0‰ |
1
|